[pdbjlvh2]Protein Model on 8a4x_A_1_E

Protein Model on 8a4x_A_1_E_1 (TEMPLATE: 8a4x )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [220 aa]	Cathepsin L :CATL1_HUMAN
2	b		E 1 (A)	non-polymer(L3F)	(phenylmethyl) N-[(2S)-3-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanyl-3-phenyl-propan-2-yl]amino]butan-2-yl]carbamate	132Q 136G 137S 138C 139W 174G 176E 179N 180G 181G 182L 248A 275D 276H 277G (identity: 100.0 %/99.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8a4x_A_1 identity=99.5%

queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :****************************************************************************************************:
8a4x_A_1       1:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EEGGGGT      B  SSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  TTB   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebebeeeebbbeebebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeeeebebbeeeebbebbebbeeeebbbbbeebebeeeeeeeeb:    
Contact         :                  b   bbbb                                  b b  bbbb                               

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :********* ******************************************************************************************:
8a4x_A_1     101:NPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 200
SecStr          : GGGEEE  S EEE  S HHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEE   TTS  EEEEEE SB TTSTBTTEEE:    
ExpBur          :eeeebebebebeeebeeebebbbebbbebbbbbbbbbbebeebeebeeebbebeebbeeeeebbbbbbbbbeeeeeeeeeebbbbbbbebeebeeebbbb:    
Contact         :                                  b                          bbb                                    

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
8a4x_A_1     201:MAKDRRNHCGIASAASYPTV: 220
SecStr          :EE SSSSGGGTTTT EEE  :    
ExpBur          :bbbeeeebbbbbbebbbbee:

Protein Model on 8a4x_A_1_E_1 (TEMPLATE: 8a4x )

Input Residue Numbers for Focused Sites