Protein Model on 7qka assembly_id=1
(TEMPLATE: 
7qka
assembly_id:1
)Protein Model on 7qka assembly_id=1
(TEMPLATE: 7qka
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase nsp5 :R1AB_SARS2 | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase nsp5 :R1AB_SARS2 | 1S 2G 3F 4R 5K 6M 7A 8F 9P 10S 11G 14E 118Y 121S 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 172H 283G 285A 286L 298R 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %) | |
| 3 | c | B 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 74Q 75L 76R (identity: 100.0 %/100.0 %) | |
| 4 | d | B 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 5 | e | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 64H 65N 67L (identity: 100.0 %/100.0 %) | |
| 6 | f | C 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 7 | g | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 15G 17M 70A 97K (identity: 100.0 %/100.0 %) | |
| 8 | h | D 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 9 | i | E 1 (A) | non-polymer(UED) | N~2~-[(benzyloxy)carbonyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide | 41H 49M 54Y 140F 141L 142N 145C 163H 164H 165M 166E 172H 187D 188R 189Q (identity: 100.0 %/100.0 %) | |
| 10 | j | E 2 (A) | non-polymer(UED) | N~2~-[(benzyloxy)carbonyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide | 1S (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7qka_A_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7qka_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHTT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E:
ExpBur :eebeeebbebeebeebbbebbbeebebbbbbbeebbbbbbbbbbeeebbeebebeeebeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :bbbbbbbbbbb bg g i i i ee e g ccc g
Contact :j
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7qka_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS B :
ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeeeebb:
Contact : b bbbbbbbb bbbbbi i iiib b iii
Contact : ii i i
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7qka_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHHHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbebeeeebeeeeebeeeebbebbeeeebbebeeebbeebeebbeebebebeebbbbbbbbbeeebeeeebeebeebbbbbbbebbebbe:
Contact : b bb bbb
queryA 301:SGVTF: 305
:*****:
7qka_A_1 301:SGVTF: 305
SecStr :HT :
ExpBur :eeeee:
Contact :bbbbb
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