[pdbjlvh2]Protein Model on 7qbm_A_1_E

Protein Model on 7qbm_A_1_E_1 (TEMPLATE: 7qbm )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [216 aa]	Cathepsin K :CATK_HUMAN
2	b		E 1 (P)	non-polymer(MG)	MAGNESIUM ION	254E(T) (identity: 0.0 %/60.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7qbm_A_1 identity=60.0%

queryA       113:EAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK: 212
                : ** *** * ********************  ******   *** *  ** ******     * ** ** *  ****** * * ***  ***   **** :
7qbm_A_1       1:RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCM:  98
SecStr          :     EEGGGGT      B  SSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH TT--S TTB   HHHHHHHHHHTT EEBTTTS   SS     :    
ExpBur          :eeeeebebeeeebbbebeebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbee--bebeeeeebbbbbebbeeeebbbbeeebeeeeeeeeee:    

queryA       213:YNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY: 311
                :***    *   *   **   ****  *** *** ******   ** **  * *    * *    * ** ****        ** *  ****** **  **:
7qbm_A_1      99:YNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK----GNKHWIIKNSWGENWGNKGY: 194
SecStr          :  GGGEEE  S EEE  TT HHHHHHHHHHH  EEEEE   SHHHHT  SSEE  TT  TT   EEEEEEEEEEET----TEEEEEEE SB TTSTBTTE:    
ExpBur          :beeebeebebebeeebeeeebebbeebbeebbbbbbbbbbeeeebeebeeeebeeeebeeeeeebbbbbbbbbeee----eeebbbbbbbebeebbeebb:    
Contact         :                                          b                                                         

queryA       312:VKMAKDRRNHCGIASAASYPTV: 333
                :  **    * ****  ** *  :
7qbm_A_1     195:ILMARNKNNACGIANLASFPKM: 216
SecStr          :EEEESSSSSGGGTTSS EEE  :    
ExpBur          :bbbbbeeebbbbbbbebbbbbe:

Protein Model on 7qbm_A_1_E_1 (TEMPLATE: 7qbm )

Input Residue Numbers for Focused Sites