[pdbjlvh2]Protein Model on 7q8j_A_1_C

Protein Model on 7q8j_A_1_C_1 (TEMPLATE: 7q8j )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (AA)	polymer(polypeptide(L)) [222 aa]	Cathepsin L2 :CATL2_HUMAN
2	b		C 1 (PA)	polymer(polypeptide(L)) [6 aa]	IILKEK Peptide	132Q 134Q 136G 137S 138C(S) 139W 174G 176E(Q) 178C 179N 180G 181G 182L(F) 183M 185Y(R) 248A 274M(L) 275D 276H 277G (identity: 75.0 %/78.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7q8j_A_1 identity=78.3%

queryA       113:EAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK: 212
                :  * ***** ********** **** ****************** * *********** **** ***** *  *****  ************ *  * **:
7q8j_A_1       1:DLPKSVDWRKKGYVTPVKNQKQCGSSWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICK: 100
SecStr          :   S EEGGGGT      B TTS  HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  GGG   HHHHHHHHHHHT EEBTTTS   SS     :    
ExpBur          :eeeeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeebebebbeeeebbebbebbeeeebbbbeeebebebeeeeee:    
Contact         :                   b b bbbb                                  b b bbbbbb b                           

queryA       213:YNPKYSVANDTGFVDI-PKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY: 311
                :* *  *** ****    *  ***************** **** ** *** **********   ************   * * ********** ***  **:
7q8j_A_1     101:YRPENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSQNSKYWLVKNSWGPEWGSNGY: 200
SecStr          :  GGGEEE  S EEE  TT HHHHHHHHHHTS EEEEE    HHHHT  SSEE  TT  SSS  EEEEEEEEEESSS TTSSEEEEEE SB TTSTBTTE:    
ExpBur          :beeeeeebebebeeebeeeebeebbebbbebbbbbbbbbbebeebeebeeeebebeebbeeeeebbbbbbbbbeeeeeeeeebbbbbbbbebeebbeebb:    
Contact         :                                    b                         bbbb                                  

queryA       312:VKMAKDRRNHCGIASAASYPTV: 333
                :** ***  ****** ***** *:
7q8j_A_1     201:VKIAKDKNNHCGIATAASYPNV: 222
SecStr          :EEEE SSSSGGGTTTS EEE  :    
ExpBur          :bebbbeeebbbbbbeebbbbee:

Protein Model on 7q8j_A_1_C_1 (TEMPLATE: 7q8j )

Input Residue Numbers for Focused Sites