[pdbjlvh2]Protein Model on 7q8h_A_1_J

Protein Model on 7q8h_A_1_J_1 (TEMPLATE: 7q8h )

CurrentView:JAVA Change to:[HTML5]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (AA)	polymer(polypeptide(L)) [221 aa]	Cathepsin L2 :CATL2_HUMAN
2	b		J 1 (AA)	non-polymer(TFA)	trifluoroacetic acid	232E 233K 236M 294K 316K 317D (identity: 100.0 %/79.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7q8h_A_1 identity=79.0%

queryA       115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN: 214
                :* ***** ********** **** ****************** * *********** **** ***** *  *****  ************ *  * *** :
7q8h_A_1       2:PKSVDWRKKGYVTPVKNQKQCGSAWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYR: 101
SecStr          : S EEGGGGT      B  SSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH TTTT  TTB   HHHHHHHHHHHT EEBTTTS   SS       :    
ExpBur          :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbeebebebbeeeebeebbebbeeeebbbbbeebebebeeeeeebe:    

queryA       215:PKYSVANDTGFVDI-PKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :*  *** ****    *  ***************** **** ** *** **********   ************   * * ********** ***  ****:
7q8h_A_1     102:PENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSQNSKYWLVKNSWGPEWGSNGYVK: 201
SecStr          :GGGEEE  S EEE  TT HHHHHHHHHHTS EEEEE   SHHHHT  SSEE  TT  SSS  EEEEEEEEEESSS TTSSEEEEEE SB TTSTBTTEEE:    
ExpBur          :eeeeebebebeeebeeeebeebbebbbebbbbbbbbbbebeebeebeeeebebeebeeeeeebbbbbbbbbeeeeebeeebbbbbbbbebeebbeebbbe:    
Contact         :                  bb  b                                                         b                   

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                : ***  ****** ***** *:
7q8h_A_1     202:IAKDKNNHCGIATAASYPNV: 221
SecStr          :EESSSSSGGGTTTS EEE  :    
ExpBur          :bbbeeebbbbbbeebbbbee:    
Contact         :  bb

Protein Model on 7q8h_A_1_J_1 (TEMPLATE: 7q8h )

Input Residue Numbers for Focused Sites