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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | H 1 (A) | polymer(polypeptide(L)) [174 aa] | GTP-binding protein YPT1 :YPT1_YEAST | |
2 | b | C 1 (G) | polymer(polypeptide(L)) [156 aa] | Trafficking protein particle complex subunit BET5 :BET5_YEAST | 37Y 40T 41I 71Q(R) (identity: 75.0 %/37.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7kmt_H_1 identity=37.5% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * * ***** * * *** ** * * * * *********** *** * *** * * * : 7kmt_H_1 8:LFKLLLIGNSGVGKSCLLLRFSDDTXXXDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTXQESFNGVKMWLQEID: 107 SecStr :EEEEEEEE TTS HHHHHHHHS --- TTTSS EEEEEEEEETTEEEEEEEEEE STTHHHHHHHSSTT SEEEEEEE - HHHHHHHHHHHHHH: ExpBur :ebbbbbbbeeebebeebbeebbeee---eeeeeebbbebeeebebeeeebebebbbbebeebeeebbeeebeebebbbbbbbbe-eebbebbeebbeebe: Contact : b bb b queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 : * *** * * * * **** *** ** * **: 7kmt_H_1 108:RYATSTVLK----LLVGNKCDXXXXRVVEYDVAKEFADANKMPFLETSAXXSTNVEDAFLTMAR: 167 SecStr :HHS TTSEE----EEEEE ---- S SHHHHHHHHHTT EEE -- SHHHHHHHHHH: ExpBur :eebeeebee----bbbbbeee----eebeeeebeebbeeeebebeebee--ebebeebbeebbe: |