#WARNING:no index is registered index "YP_009725301.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725301.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7giy assembly_id=1

Protein Model on 7giy assembly_id=1 (TEMPLATE: 7giy assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description b(query A)
1 a A 1 (A) polymer(polypeptide(L)) [301 aa] 3C-like proteinase :R1AB_SARS2 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 115L 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 172H 280T 283G 285A 286L 290E 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %)
2 b A(queryA) B 1 (B) polymer(polypeptide(L)) [305 aa] 3C-like proteinase :R1AB_SARS2
3 c C 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 118Y 123S (identity: 100.0 %/100.0 %)
4 d D 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE
5 e E 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE
6 f F 1 (A) non-polymer(OI4) (4R)-6-chloro-N-(4-methylpyridin-3-yl)-3,4-dihydro-2H-1-benzopyran-4-carboxamide
7 g G 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE
8 h H 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 123S (identity: 100.0 %/100.0 %)
9 i I 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 6M 8F 127Q 295D 298R (identity: 100.0 %/100.0 %)
10 j J 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 2G 3F 4R 282L 283G (identity: 100.0 %/100.0 %)
11 k K 1 (B) non-polymer(OI4) (4R)-6-chloro-N-(4-methylpyridin-3-yl)-3,4-dihydro-2H-1-benzopyran-4-carboxamide 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 187D 188R 189Q (identity: 100.0 %/100.0 %)
12 l L 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 5K 7A 125V 126Y 127Q (identity: 100.0 %/100.0 %)
13 m M 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 14E 15G 17M 18V 31W 70A 97K (identity: 100.0 %/100.0 %)
14 n N 1 (B) non-polymer(CL) CHLORIDE ION 249I 252P 297V (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[2] Protein A "queryA" TEMPLATE:7giy_B_1 identity=100.0%
queryA         1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
                :****************************************************************************************************:
7giy_B_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  HHHHHS  HHHHHHT  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  E:    
ExpBur          :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:    
Contact         :aajaaaaaaaa  am mm            m         k       k                    m                          m   
Contact         : j jlili     m                                                                                      

queryA       101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
                :****************************************************************************************************:
7giy_B_1     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SSSS        B :    
ExpBur          :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeebbbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:    
Contact         :              a  c   aaaaaaa        aaaaak kk                 kkka     a              kkk           
Contact         :                      c lli            kk                        k                                  
Contact         :                      h   l                                                                         

queryA       201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
                :****************************************************************************************************:
7giy_B_1     201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHHHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeeeeebbeeeebeeeebeebbeeeebeebeeeebeebeebeeebebebeebbbbbbebbeeebeeeebeeeeebebbbbbebbeeee:    
Contact         :                                                n  n                           a ja aa   a    i niaa
Contact         :                                                                                  j                 

queryA       301:SGVTF: 305
                :*****:
7giy_B_1     301:SGVTF: 305
SecStr          :HT   :    
ExpBur          :eeeee:    
Contact         :aaaaa                                                                                               


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