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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [175 aa] | Chains: A,B :A0A135VL07_9ARCH | |
2 | b | D 1 (B) | non-polymer(GSP) | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE | 16D 17S(G) 18G(A) 19V 20G 21K 22T 23S(A) 33F 35N(T) 66G 67Q 125N 126K 128D 129L 155S 156A 157K(L) (identity: 73.7 %/38.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ezd_B_1 identity=38.8% |
queryA 10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD--RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* *** **** * ** * ** ** **** *** ** * ***** * *** ** * * : 7ezd_B_1 8:KIVMLGDGAVGKTAMTTRFTQNFFDTDXXXXXXSDFAVKRLQLDDINAHVTLQIWDLAGQPRFESVRQGFYRGARGGLLLYDVTRRRTFINIENWKEE--: 105 SecStr :EEEEE STTSSHHHHHHHHHHS ------ EEEEEEEETTTTEEEEEEEEE SS SS TTTSTTEEEEEEEEETT HHHHHTHHHHHHH--: ExpBur :bbbbbbbbebbbeebbeebeeeeeeee------eeeeeeebebeeeebebbbebbebeeeeeeeeebeebbeebebbbbbbbbeeeebbebbeebbeb--: Contact : bbbbbbbb b b bb queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNN-IPYFETSAKEAINVEQAFQTIARNALKQETEV: 180 : * * ** ** ** * *** * *** * * ** *** * * : 7ezd_B_1 106:--AFRSLQKEIPLVVVANKVDLKDSRVVATEEGEE--YAKNNSFMYVESSALTGENVEEAYANLCRIMIEESKDI: 176 SecStr :--HHHHHTS EEEEEE TT GGG S HHHHHH--HHHHTT EEEE TTT TTHHHHHHHHHHHHHHHHHHH: ExpBur :--bbeebeeebbbbbbbbebeeeeeeebeeeebee--bbeeeebebbbbbbeeeeebeebbeebbeebbeeeeee: Contact : bb bb bbb |