Protein Model on 6zsi assembly_id=1 (TEMPLATE: 6zsi assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [171 aa] Ras-related protein Rab-8A :RAB8A_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [130 aa] EH domain-binding protein 1 :EHBP1_HUMAN 38K(I) 41I 43A(I) 44D 45F 58T(K) 60Q 62W 69R 70F 77F(Y) (identity: 63.6 %/41.9 %)
3 c E 1 (A) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 16D 17S 18G 19V 20G 21K 22T 23S(C) 33F 34S(N) 35N(S) 36Q(T) 37Y(F) 39A(S) 40T 64T 65A 66G 125N 126K 128D 129L(V) 155S 156A 157K (identity: 72.0 %/41.9 %)
4 d F 1 (A) non-polymer(PEG) DI(HYDROXYETHYL)ETHER 16D 71Q(R) 98T(N) 101S(N) 102W 105E(N) (identity: 33.3 %/41.9 %)
5 e G 1 (A) non-polymer(MG) MAGNESIUM ION 22T 40T 63D (identity: 100.0 %/41.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6zsi_A_1 identity=41.9%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    ********          *      *** **       *      ***********     * ****    ** * *    *     *     :
6zsi_A_1      10:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 109
SecStr          :EEEEEEE STTSSHHHHHHHHHHS    S     SEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHHTTSTT SEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebebbbbbbeebbbbbbbebbbeeeeeeeeeebebeeeeeeebebeebebebbbbbbbbbeebeeebeeebeebebbbbbbbbbeeebbebbeebbeebe:    
Contact         :        cccccccc         cccccbccb bbb            b b beccc  bbd     b                    d  dd  d  
Contact         :        d     e                 e                                                                   

queryA       108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
                :  **  * *      **** *    ***   *          *   *****  **** ** * ** :
6zsi_A_1     110:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 170
SecStr          :HHS T-T EE---EEEEE TT GGG  S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH:    
ExpBur          :eebee-ebbe---bbbbbebeeeeeeebeeeebeeebeee-ebebbbbbbeeeeebeebbeebbee:    
Contact         :                 cc cc                          ccc                                                 


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