CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
2 | b | G 1 (B) | non-polymer(TRS) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | 108I(E) 109Q(H) 111S(U) (identity: 0.0 %/41.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6stg_B_1 identity=41.2% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ******** * *** ** * *********** * **** ** * * * * : 6stg_B_1 4:LFKLLLIGDSGVGKTCVLFRFSEDAFNSXXISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 103 SecStr :EEEEEEE TTS HHHHHHHHHSS -- S EEEEEEEEETTEEEEEEEEE SGGGHHHHHTT TT SEEEEEEETT HHHHHHHHHHHHHHH: ExpBur :ebbbbbbbbeebbbeebbebbeeeeeee--eebeeeeeeeeebebeeeebebebbbbbbeeebeeebeeebeebebbbbbbbbbeeebbeebeebbeebe: queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172 : * * * **** * *** * * ***** **** ** * ** : 6stg_B_1 104:EHAUA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 164 SecStr :HHS T-T EE---EEEEE TT GGG S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH: ExpBur :eebee-ebbb---bbbbbebeeeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbebbbeb: Contact :bb b |