Protein Model on 6l6o assembly_id=1 (TEMPLATE: 6l6o assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [165 aa] Rab5a :A0A109NYM0_LEIDO
2 b B 1 (A) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE 16D(E) 17S 18G 19V(A) 20G 21K 22T(S) 23S 33F 34S(L) 35N(A) 36Q(N) 68E 125N 126K 128D 129L 155S 156A 157K (identity: 70.0 %/40.1 %)
3 c C 1 (A) non-polymer(GOL) GLYCEROL 128D 129L 130E(G) 131N(S) (identity: 50.0 %/40.1 %)
4 d D 1 (A) non-polymer(ACT) ACETATE ION 141A(R) (identity: 0.0 %/40.1 %)
5 e E 1 (A) non-polymer(MG) MAGNESIUM ION 22T(S) 63D (identity: 50.0 %/40.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6l6o_A_1 identity=40.1%
queryA        10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109
                :*   ** ** ** *         *      **** ** * ** * *     ****** *** **    ****     * * *     *    *  *    :
6l6o_A_1      17:KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRAN: 116
SecStr          :EEEEEESTTSSHHHHHHHHHHS   SS  TTTS SEEEEEEE SSSEEEEEEE  TTGGGGT   HHHHTT SEEEEEEETT HHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbeebbbeebbbbbbeeeeeeeeeeeeeeeebeeebeeeeeebebebebbebebeeeebeeebbeebebbbbbbbbbeeebbeebeebbeebeee:    
Contact         :      bbbbbbbb         bbbb                          e    b                                         
Contact         :            e                                                                                       

queryA       110:ASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :* *        *  *** **   ***     *            * ***   **** *   *:
6l6o_A_1     117:ADP----SLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA: 174
SecStr          :S T----T EEEEEEE TT GGG  S HHHHHHHHHHTT SEEEE BTTTTBSHHHHHHHHH:    
ExpBur          :bee----ebbbbbbbbeeeeeeeeebeeeebeebbeebebeebbbbbbeeeeebeebbeebb:    
Contact         :               bb bbccc         d             bbb                                                   
Contact         :                  cc                                                                                


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