Protein Model on 5vqi_A_1_C_1
(TEMPLATE: 
5vqi
)Protein Model on 5vqi_A_1_C_1
(TEMPLATE: 5vqi
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [421 aa] | Importin subunit alpha :Q9C2K9_NEUCS | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [6 aa] | Nuclear localization sequence of NIT2 transcription factor (NIT2-NLS) | 280D 281G 315R 319N 321V 322T 323G 325D 328T 354E 357W 360S 361N 364A 365G 396E 399W (identity: 100.0 %/50.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5vqi_A_1 identity=50.7% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180
: * * ** * *** ***** * *** * * ** ** * *** ********** ** * ** * * ** ** *:
5vqi_A_1 33:MVEGVFSSEIDKQIQATTKFRKLLSKERNPPIEEVIKTGVVGRFVEFL-RSPHTLVQFEAAWALTNIASGSATQTQVVIEAGAVPIFVELLGSPEPDVRE: 131
SecStr :HHHHHHSS HHHHHHHHHHHHHHTT SS HHHHHHHT HHHHHHHT-T S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT SSHHHHH:
ExpBur :beebbebeeeeebbebbbebbeebebeeeebbeebbeeebbebbbebb-ebeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbebeeeebeb:
queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280
:************ ** * ** *** ** * *** ****** ** * * * ** * * * *** * ******* *:
5vqi_A_1 132:QAVWALGNIAGDSPQCRDYVLSCGALRPLLTLLG----DSRKLSMLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLVYSLDDEVLIDACWAISYLSD: 227
SecStr :HHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHH----H HHHHHHHHHHHHHHH TT HHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHS:
ExpBur :bbbebbbbbbeeebebbeebbeeebbeebbebbe----eeeeeebbebbbebbbbbbeeeeeebebeebbebbebbbebbeeebeebbeebbebbbbbbe:
Contact : b
queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380
:* * * * * ** ** ***** ****** * **** * *** *** * * *** ** ****** *** * *:
5vqi_A_1 228:GSNDKIQAVIEAGIPRRLVELLMHASTSVQTPALRSVGNIVTGDDVQTQVIINCGALPCLLSLLSSNKDGIRKEACWTISNITAGNSAQIQSVIDANIIP: 327
SecStr :S HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHTTS HHHHHHHHHTT HH:
ExpBur :eeeebbeebbeeebbeebbebbeeeeeebbebbbebbbbbbebeeebbeebbebebbebbeebbebeeeebbebbbebbbebbebeeebbeebbebebbe:
Contact :b b b bbb b b b b bb bb
queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGG--TVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE--------KLGETEKLSIMIEECGGL: 470
: * ** ** ** *** ** * **** ** *** * * ** ** * *** * ** ** * ****** :
5vqi_A_1 328:PLIHLLSHADLKTRKEACWAISNATSGGLQKPDQIRYLVAQGCIKPLCDLLACPDNKIIQVALDGLENILKVGELDKNAAXXXXXSINRYALFIEECGGM: 427
SecStr :HHHHHTTSS HHHHHHHHHHHHHTTTTTTT THHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHHHHHHHT ----- HHHHHHHHHTHH:
ExpBur :ebbebbebeeeebeebbbebbbbbbebeeeeeebbeebbeeebbebbbebbebeeeebbbbbbebbbebbebbeeeeeee-----eebebbebbeeeebe:
Contact : b b
queryA 471:DKIEALQNHENESVYKASLSLIEKYFS: 497
: ** * ** * ******:
5vqi_A_1 428:EKIHDCQTNANEEIYMKAYNIIEKYFS: 454
SecStr :HHHHGGGG HHHHHHHHHHHHHH :
ExpBur :eebeebeebebeebeeebeebbeebbe:
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[assembly_id:1]
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