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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [422 aa] | Importin subunit alpha :IMA1_YEAST | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [454 aa] | Guanine nucleotide exchange factor SRM1 :RCC1_YEAST | 89N(D) 90V(M) 91E(Q) 92N(E) 94L 95Q(S) 98Q(V) 99A(K) 101R 102K(Q) 105S 106R 107E 133C(P) 134S(E) 135P(M) 138F(L) 139E 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 187G 188N 191G 192D 231W 234S 235N 238R 270D 273W 277Y 321V 322T 323G 324T(N) 325D 328T 357W 361N 364A 395K 396E 399W 435K(R) (identity: 73.1 %/49.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5t94_B_1 identity=49.6% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180 : ** ** ** * **** **** * ** * * * * * ************ *** *** * * ** ** *: 5t94_B_1 92:MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKE: 191 SecStr :HHHHHTSS HHHHHHHHHHHHHHHT SSS HHHHHHTT HHHHHHTTSSSS HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHH: ExpBur :beebbeeeeeeebbebbeebbeebeeeeeeebeebeeeebbebbbebbeeebeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbeebeeebeb: Contact : bbbb bb bb bb bbb bbb bb b b bbbbb b queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280 :** ***** *** ** * * * * * * * ********* * * * * * **** * * * * * ******* *: 5t94_B_1 192:QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----NSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSD: 286 SecStr :HHHHHHHHHHHH HHHHHHHHHTT HHHHHHGG-----G HHHHHHHHHHHHHHS STT HHHHGGGHHHHHHHTT HHHHHHHHHHHHHHSS: ExpBur :bbbebbbbbbeeeeebbeebbeeebbebbbebb-----eeeeeebbebbbebbbbbbeeeeeebeeeebeebbebbbebbeeeeeebbbbbbebbbebbe: Contact :b b bb bb b bb b b b b queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380 :** * * * ** ** ****** ****** * ****** ** * ** ** ** *** ** ****** *** * * *: 5t94_B_1 287:GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIP: 386 SecStr :SSHHHHHHHHHTT HHHHHHTTS SSHHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHTTS HHHHHHHHHTT HH: ExpBur :eeeebbeebbebebbeebbebbeeeebebbbbbbebbbbbbebeeebbeebbeeebbebbeebbebeeeebeebbbebbbebbeeeeebbeebbeeebbb: Contact : bbbbb b b b b queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473 : ** * * ** *** ** * *** * *** * * ** ** * ** * *** ** * * * * ** ** **: 5t94_B_1 387:PLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKI: 486 SecStr :HHHHHHHHS HHHHHHHHHHHHHHHGGGTT THHHHHHHHTT HHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHTTTTT SS TTTHHHHHTT HHHH: ExpBur :bbbebbeebeeebbbbbbebbbebbebbeeeeebbeebbeeebbebbbebbeebeeebbebbbebbeebbebbeeeeeeeeeeebebbeebeebebeebb: Contact : bb b b queryA 474:EALQNHENESVYKASLSLIEKYF: 496 : * ** * ** **: 5t94_B_1 487:FNCQQNENDKIYEKAYKIIETYF: 509 SecStr :HTTSSS HHHHHHHHHHHHHH : ExpBur :eebeeeeeeebeeebeebbeebe: |