Protein Model on 5fbq_B_1_A_1
(TEMPLATE: 
5fbq
)Protein Model on 5fbq_B_1_A_1
(TEMPLATE: 5fbq
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [162 aa] | Ras-related protein Rab-11A :RB11A_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [467 aa] | Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta :PI4KB_HUMAN:PI4KB_HUMAN | 10K 34S(N) 36Q(E) 37Y(S) 38K 41I 42G 43A(V) 45F 47T 49E(S) 58T(K) 62W 72S(A) (identity: 50.0 %/39.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5fbq_B_1 identity=39.5% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* ** ******* * * * *** * * ** ***** * **** ** * * * * :
5fbq_B_1 16:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTXXXXXXRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 115
SecStr :EEEEEEE STTSSHHHHHHHHHH SS S EEEEEEEEETTEEEEEEEEE ------ GGGGTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbbeebebebbbbbbbeeeeeeeeeeeeeeeeeeeebebeeeebebebbbe------eeeeeebbeebebbbbbbbbbeeebbeebeebbeebe:
Contact : b b bbb bbb b b b b b b
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** ** * * * * * ** **** *** *****:
5fbq_B_1 116:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 173
SecStr :HHS T----T EEEEEEE TT GGG S HHHHHHHH-HHTT EEEEE TTT SSHHHHHHHH:
ExpBur :eeeee----ebbbbbbbbbeeeeeeeebeeeebeeeb-eeeebebbbbbbeeeeebeebbeeb:
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[assembly_id:1]
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