Protein Model on 5ekf_C_1_B_1
(TEMPLATE: 
5ekf
)Protein Model on 5ekf_C_1_B_1
(TEMPLATE: 5ekf
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | C 1 (A) | polymer(polypeptide(L)) [425 aa] | Importin subunit alpha-1 :IMA1_MOUSE | |
| 2 | b | B 1 (C) | polymer(polypeptide(L)) [10 aa] | DNA repair protein complementing XP-G cells :ERCC5_HUMAN | 104L 105S 106R 107E 110P 138F 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 188N 191G 192D 228N 231W 235N 238R 270D 273W 277Y (identity: 100.0 %/94.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5ekf_C_1 identity=94.4% |
queryA 72:GTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 171
:******* ******** * * ************************************* *****************************************:
5ekf_C_1 53:GTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 152
SecStr : TT HHHHHHHHTSS HHHHHHHHHHHHHHHT SS HHHHHHTTHHHHHHHHHT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHT:
ExpBur :ebeeeeeeebeebbeeeeeeebbbbbebbbebbeeeeeebbeebeeeebbeebbebbeeeebeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebb:
Contact : bbbb b b b b bbbbb b
queryA 172:ASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADT: 271
:*********************** ******* ** *********** * ************************* **************** ******* :
5ekf_C_1 153:ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADS: 252
SecStr :T S HHHHHHHHHHHHHHHHT HHHHHHHHHTT HHHHHHHT SS GGGS HHHHHHHHHHHHHHH TT HHHHHHHHHHHHHHTT S HHHHHHH:
ExpBur :ebeeeebbebbbebbbbbbeebbebbeebbeeebbeebbeebeeeebeebeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbebebeebbbeb:
Contact : b b b bb b b b b b
queryA 272:CWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 371
:*************** **** ************ ************************ *****************************************:
5ekf_C_1 253:CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 352
SecStr :HHHHHHHTSS HHHHHHHHTTT HHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTGGGGHHHHTT SSHHHHHHHHHHHHHHTTS HHHHH:
ExpBur :bebbbbbbeeeeebbeebbeeebbebbbebbeeeeeebbbbbbebbbbbbebeeebbbebbeeebbebbeebbeeeeeebbebbbebbbebbebeeebbe:
Contact : b b
queryA 372:QVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 471
:************ ************* ** **************************** ******* *********************************:
5ekf_C_1 353:QVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 452
SecStr :HHHHTT HHHHHHHHHSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHTTHHH:
ExpBur :ebbeeebbeebbebbeeeeeebbbebbebbbebbeebeeebbeebbeeebbebbbebbeeeeeebbebbbebbebbbebbeeeeeeeebeeebeeeebee:
queryA 472:KIEALQNHENESVYKASLSLIEKYF: 496
:****** *********** ******:
5ekf_C_1 453:KIEALQRHENESVYKASLNLIEKYF: 477
SecStr :HHHHGGG SSHHHHHHHHHHHHHH :
ExpBur :ebbebeeeeeeebbeebeebeeeee:
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[assembly_id:1]
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