[pdbjlvh2]Protein Model on 4x6j_A_1_C

Protein Model on 4x6j_A_1_C_1 (TEMPLATE: 4x6j )

CurrentView:JAVA Change to:[HTML5]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [215 aa]	Cathepsin K :CATK_HUMAN
2	b		C 1 (A)	non-polymer(CL)	CHLORIDE ION	210S 211C (identity: 100.0 %/60.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4x6j_A_1 identity=60.3%

queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :** *** * ********************  ******   *** *  ** ******     * ** ** *  ****** * * ***  ***   **** *:
4x6j_A_1       1:APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMY:  98
SecStr          :  S EETTTTT      B TTS  HHHHHHHHHHHHHHHHHHS    B HHHHHHH TT--S GGG   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebbbeeeebbbebeebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbee--bebeeeeebbebbebbeeeebbbbbeebeeeeeeeeeeb:    
Contact         :                                                                                                bb  

queryA       214:NPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :**    *   *   **   ****  *** *** ******   ** **  * *    * *    * ** ****        ** *  ****** **  ** :
4x6j_A_1      99:NPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK----GNKHWIIKNSWGENWGNKGYI: 194
SecStr          : GGGEEE   EEEE  TT HHHHHHHHHHH  EEEEE   SHHHHT  SSEE  TT  TT   EEEEEEEEEEET----TEEEEEEE SB TTSTBTTEE:    
ExpBur          :eeeeeebebebeeebeeeebeebbebbbebbbbbbbbbbebeebeebeeeebeeeebeeeeeebbbbbbbbbeee----eeebbbbbbbebeebeeebbb:    

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                : **    * ****  ** *  :
4x6j_A_1     195:LMARNKNNACGIANLASFPKM: 215
SecStr          :EEESSSSSGGGTTSS EEEE :    
ExpBur          :bbbbeeebbbbbbbebbbbee:

Protein Model on 4x6j_A_1_C_1 (TEMPLATE: 4x6j )

Input Residue Numbers for Focused Sites