Protein Model on 4uj3 assembly_id=5 (TEMPLATE: 4uj3 assembly_id:5 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) M 1 (M) polymer(polypeptide(L)) [174 aa] RAS-RELATED PROTEIN RAB-11A :RB11A_HUMAN
2 b N 1 (N) polymer(polypeptide(L)) [164 aa] RAB-3A-INTERACTING PROTEIN :RAB3I_HUMAN 33F 35N(L) 36Q(E) 128D 129L 130E(R) 131N(H) 132R 133Q(A) 157K(L) (identity: 40.0 %/42.0 %)
3 c O 1 (O) polymer(polypeptide(L)) [37 aa] RAB11 FAMILY-INTERACTING PROTEIN 3 :RFIP3_HUMAN 42G 43A(V) 44D(E) 45F 47T 62W 73L(I) 76A (identity: 62.5 %/42.0 %)
4 d GA 1 (M) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 37Y(S) 38K 39A(S) 40T 64T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 70.8 %/42.0 %)
5 e HA 1 (M) non-polymer(MG) MAGNESIUM ION 22T(S) 40T 63D 64T (identity: 75.0 %/42.0 %)
6 f IA 1 (M) non-polymer(SO4) SULFATE ION 140Q(R) 151Y(F) 152F(I) (identity: 0.0 %/42.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4uj3_M_1 identity=42.0%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* **   *******  *        *    * ***  * *    **      ******* **      * ****    ** *     *      *  *  :
4uj3_M_1      12:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERXXAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 111
SecStr          :EEEEEEEE TTSSHHHHHHHHHH    TT     SEEEEEEEEEETTEEEEEEEEEE S   --  HHHHHTTEEEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbebbbebbebeeeeeeeeebeeeeeeeeebebeeeebebebebbbbeee--eebeebbeebebbbbbbbbbeeebbeebeebbebbe:    
Contact         :         ddddddd         bdbbdddd cccc c              ceddd      c  c                               
Contact         :              e          d d    e                       e                                           

queryA       108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :  *      *      *** **   * * *  * *    **     ****    *** *****:
4uj3_M_1     112:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 169
SecStr          :HHS T----T EEEEEEE TT SSS  S HHHHHHHH-HHTT EE  B TTT TTHHHHHHHH:    
ExpBur          :eebee----ebbbbbbbbebeeeeeeebeeeebeeeb-eeeebbbbbbbbeeeeebeebbeeb:    
Contact         :                 dd bbbb bb      f          ff  ddb                                                 
Contact         :                    dd                            d                                                 


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