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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [421 aa] | Importin subunit alpha :Q9C2K9_NEUCS | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [8 aa] | Large T antigen :LT_SV40 | 104L 105S 106R(K) 107E 110P 138F 142W 146N 148A 149S 150G 151T(S) 155T 181Q 184W 187G 188N 191G 192D 231W 235N 238R 270D 273W (identity: 91.7 %/50.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4rxh_A_1 identity=50.7% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180 : * * ** * *** ***** * *** * * ** ** * *** ********** ** * ** * * ** ** *: 4rxh_A_1 33:MVEGVFSSEIDKQIQATTKFRKLLSKERNPPIEEVIKTGVVGRFVEFL-RSPHTLVQFEAAWALTNIASGSATQTQVVIEAGAVPIFVELLGSPEPDVRE: 131 SecStr :HHHHHTSS HHHHHHHHHHHHHHHT SS HHHHHHTT HHHHHHHT-T S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHH: ExpBur :beebbebeeeeebbebbbebbeebeeeeeeebeebbeeebbebbbebb-ebeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbebeeeebeb: Contact : bbbb b b b b bbbb b queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280 :************ ** * ** *** ** * *** ****** ** * * * ** * * * *** * ******* *: 4rxh_A_1 132:QAVWALGNIAGDSPQCRDYVLSCGALRPLLTLLG----DSRKLSMLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLVYSLDDEVLIDACWAISYLSD: 227 SecStr :HHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHH----H HHHHHHHHHHHHHHH TT HHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHTS: ExpBur :bbbebbbbbbeeebebbeebbeeebbeebbebbe----eeeeeebeebbbebbbbbbeeeeeebebeebeebbebbbebbeeebeebbeebbebbbebbe: Contact :b b bb bb b b b b b queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380 :* * * * * ** ** ***** ****** * **** * *** *** * * *** ** ****** *** * *: 4rxh_A_1 228:GSNDKIQAVIEAGIPRRLVELLMHASTSVQTPALRSVGNIVTGDDVQTQVIINCGALPCLLSLLSSNKDGIRKEACWTISNITAGNSAQIQSVIDANIIP: 327 SecStr :S HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HH: ExpBur :eeeebbeebbeeebbeebbebbeeeeeebbebbbebbbbbbebeeebbeebbebebbebbeebbebeeeebbebbbebbbebbebeeebbeebbebebbe: queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGG--TVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE--------KLGETEKLSIMIEECGGL: 470 : * ** ** ** *** ** * **** ** *** * * ** ** * *** * ** ** * ****** : 4rxh_A_1 328:PLIHLLSHADLKTRKEACWAISNATSGGLQKPDQIRYLVAQGCIKPLCDLLACPDNKIIQVALDGLENILKVGELDKNAAXXXXXSINRYALFIEECGGM: 427 SecStr :HHHHHHHSS HHHHHHHHHHHHHTTTTTTT THHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHHHHHHHT ----- HHHHHHHHTTHH: ExpBur :ebbebbeeeeeebeebbbebbbbbbebbeeeeebbeebbeeebbebbbebbebeeeebbbbbbebbbebbebbeeeeeee-----eebebbeebeeeebe: queryA 471:DKIEALQNHENESVYKASLSLIEKYFS: 497 : ** * ** * ******: 4rxh_A_1 428:EKIHDCQTNANEEIYMKAYNIIEKYFS: 454 SecStr :HHHHHGGG SSTTHHHHHHHHHHH : ExpBur :eebeebeebeeeebeeebeebbeeebe: |