Protein Model on 4qxa assembly_id=1 (TEMPLATE: 4qxa assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [172 aa] Ras-related protein Rab-9A :RAB9A_MOUSE
2 b B 1 (B) polymer(polypeptide(L)) [147 aa] Small G protein signaling modulator 1 :SGSM1_MOUSE 38K(F) 40T 41I 42G 43A(V) 44D(E) 45F 46L 69R 70F 77F (identity: 72.7 %/54.7 %)
3 c C 1 (A) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE 16D 17S(G) 18G 19V 20G 21K 22T(S) 23S 33F 34S(D) 35N(S) 36Q 37Y(L) 38K(F) 39A(H) 40T 64T 65A 66G 125N 126K 128D 129L(I) 155S 156A 157K (identity: 69.2 %/54.7 %)
4 d D 1 (A) non-polymer(MG) MAGNESIUM ION 22T(S) 40T 63D (identity: 66.7 %/54.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4qxa_A_1 identity=54.7%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* * * *** **** **** **  **  *   ***  ** *   **   ********** *** **   **** *** * * *     *  *  *  ** :
4qxa_A_1       8:LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFI: 107
SecStr          :EEEEEEEESTTSSHHHHHHHHHH           S EEEEEEEEETTEEEEEEEEE   SGGGHHHHGGGTTT SEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbeebbebbeeeeeeeeeeebeeeeeeeeebebeeeebebbbbbbbbeeebeeebbeebeebebbbbbbbbeeeebbebbeebbebbe:    
Contact         :        cccccccc         cccccbcbbbbbbb                dccc  bb      b                              
Contact         :              d               c c                                                                   
Contact         :                                d                                                                   

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE: 177
                :  *    ** **** **** *   *** *  *****      ********   **  **    *  *  *:
4qxa_A_1     108:YYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATE: 177
SecStr          :HHH  S TTTS EEEEEE TT SS SS HHHHHHHHHTTT   EEE  TTT TTHHHHHHHHHHHHHHHT:    
ExpBur          :eebeeeeeeebbbbbbbbeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbebbbeebbeee:    
Contact         :                 cc cc                         ccc                                                  


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