Protein Model on 4phg assembly_id=1 (TEMPLATE: 4phg assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [176 aa] GTP-binding protein YPT7 :YPT7_YEAST
2 b B 1 (A) non-polymer(MG) MAGNESIUM ION 22T 40T 63D (identity: 100.0 %/68.4 %)
3 c C 1 (A) non-polymer(2UJ) N-[3-(propanoylamino)propyl]guanosine 5'-(tetrahydrogen triphosphate) 16D 17S 18G 19V 20G 21K 22T 23S 33F(Y) 34S 35N(C) 36Q 37Y 39A 40T 65A 66G 125N 126K 128D 155S 156A 157K (identity: 91.3 %/68.4 %)
4 d D 1 (A) non-polymer(YT3) YTTRIUM (III) ION 31K(D) (identity: 0.0 %/68.4 %)
5 e E 1 (A) non-polymer(YT3) YTTRIUM (III) ION 68E 105E (identity: 100.0 %/68.4 %)
6 f F 1 (A) non-polymer(YT3) YTTRIUM (III) ION 116E (identity: 100.0 %/68.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4phg_A_1 identity=68.4%
queryA         6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD: 104
                :*  *****************  *** * * ** ************ ** *   *** ***** ******************** ***    *    ****:
4phg_A_1       8:KNILKVIILGDSGVGKTSLMHRYVNDKYSCQYIATIGADFLTKEVTVDGDKVATMQVWDTAGLERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRD: 107
SecStr          : EEEEEEEEE TTSSHHHHHHHHHH    SS     SEEEEEEEEEETTTEEEEEEEEEE SSGGG TTGGGGTTT SEEEEEEETT HHHHHTHHHHHH:    
ExpBur          :eeebbbbbbbbeebbbbebbebbbeeeeeeeeeeeeeeeeeeeebebeeeeebebebbbbbbeeeebeeeeebbeebbbbbbbbbbeeeebbeebeebbe:    
Contact         :          ccccccbc       d ccccc cb                       b cc e                                    
Contact         :                c                 c                                                                 

queryA       105:EFLIQASPRDPENFPFVVLGNKIDLENRQ--VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                :***  *    ** **** ****** *     *  * **    *   ** * **** ****  **  *** ** *:
4phg_A_1     108:EFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ: 181
SecStr          :HHHHHTT S TTTS EEEEEE TTS TTT  S HHHHHHHHHHTTS  EEEEBTTTTBSHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeebeeeeebbbbbbbbeeebeeeeeebeeeebeebbeebeebeebbbbbeeeeebeebbeebbebbbee:    
Contact         :e          f        cc c                            ccc                                             


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