Protein Model on 4li0_A_1_E_1
(TEMPLATE: 
4li0
)Protein Model on 4li0_A_1_E_1
(TEMPLATE: 4li0
)| CurrentView:JAVA Change to:[HTML5] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [64 aa] | Guanine nucleotide exchange factor for Rab-3A :R3GEF_HUMAN | 10K 37Y(F) 43A(I) 44D 45F 46L(K) 47T(I) 60Q 62W 73L(I) 75V(T) 76A 77F(Y) 79R (identity: 50.0 %/41.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4li0_A_1 identity=41.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******** * *** ** * *********** * **** ** * * * * :
4li0_A_1 10:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 109
SecStr :EEEEEEEE TTSSHHHHHHHHTT S STTTTSEEEEEEEEEETTEEEEEEEEEE GGGHHHHHHHHHH SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbeeebbbbebbbebbeeeeeeeebeeebbbeeeeebebeeebbebebebbeeeeeebeebbebbeebebbbbbbbbeeeebbeebeebbeebe:
Contact : b b bbbbb b b b bbb b
queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: ** * * **** * *** * * ***** **** ** * ** :
4li0_A_1 110:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 170
SecStr :HHS T-T EE---EEEEE TT TT S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH:
ExpBur :eebee-ebee---bbbbbebebeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbee:
|
[assembly_id:1]
[help]