Protein Model on 4i1o_A_1_L_1 (TEMPLATE: 4i1o )

CurrentView:JAVA Change to:[HTML5] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [177 aa] Ras-related protein Rab-1B :RAB1B_HUMAN
2 b L 1 (A) non-polymer(PEG) DI(HYDROXYETHYL)ETHER 33F(Y) 35N(E) 37Y 157K (identity: 50.0 %/40.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4i1o_A_1 identity=40.3%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    *******  *            *  *** **       *      ***********       ****     * ***          *  *  :
4i1o_A_1       9:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr          :EEEEEEE STTSSHHHHHHHHHHS          SEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHGGGTTT SEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebebbbbbbeebbbeebbbbbeeeeeeeeeeebebeeeeeeebebeebebebebbbbbbbeebeeebbeebeebebbbbbbbbeeeebbeebeebbebbe:    
Contact         :                         b b b                                                                      

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :  **    **      *** **    *              **  ***** * ****** * *:
4i1o_A_1     109:RYAS----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr          :HHS ----TT EEEEEEE TT TTT  S HHHHHHHHHTTT  EEE  SSS TTHHHHHHHHH:    
ExpBur          :eebe----eebbebbbbbeeeeeeeeebebeebbeebeeeebeebbbbbeeeeebeebbebbb:    
Contact         :                                                 b                                                  


Input Residue Numbers for Focused Sites

ex) 2,15,123