Protein Model on 4fmd_F_1_O_1 (TEMPLATE: 4fmd )

CurrentView:JAVA Change to:[HTML5] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) F 1 (F) polymer(polypeptide(L)) [149 aa] Ras-related protein Rab-1A :RAB1A_HUMAN
2 b O 1 (F) non-polymer(AF3) ALUMINUM FLUORIDE 16D 17S 18G 21K 40T 66G (identity: 100.0 %/38.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4fmd_F_1 identity=38.2%
queryA        10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109
                :*    *******  *               *** **               **********       ****     * ***    *     *  *    :
4fmd_F_1       1:KLLLIGDSGVGKSCLLLRFADDTYTXXXISTIGVDFKIRXXXXXXXXXXXXIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRY: 100
SecStr          :  EEEE TTSSHHHHHHHHHHS   ---    SEEE   ------------ EEE  SGGGHHHHHTTGGG SEEEEEEESS HHHHHTHHHHHHHHHHH:    
ExpBur          :ebbbbbbeebbbeebbbbeeeeeee---eebebeeeeee------------bebbbbeeeebeebbeebeebebbbbbbbbeeeebbebbeebbebbeee:    
Contact         :      bbb  b                  b                         b                                           

queryA       110:ASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :**    **      *** **    *              **  ***** * **** * * *:
4fmd_F_1     101:AS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 157
SecStr          :S ----TT EEEEEEE TT  TT  S HHHHHHHHGGGT  EEE BTTTTBTHHHHHHHHH:    
ExpBur          :be----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbebbbeeeeebeebbeebe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123