Protein Model on 3tw8 assembly_id=1 (TEMPLATE: 3tw8 assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description b(query A)
1 a A 1 (A) polymer(polypeptide(L)) [343 aa] DENN domain-containing protein 1B :DEN1B_HUMAN 10K 12I(L) 17S 36Q(S) 37Y 38K(I) 39A(T) 40T 41I 42G 43A(V) 44D 45F 62W 64T 65A 66G 69R 70F 71Q(R) 72S(T) 73L(I) 74G(T) 75V(S) 76A(T) 77F(Y) 79R 80G 81A(T) 114D(N) (identity: 53.3 %/37.4 %)
2 b A(RAB7A_HUMAN) B 1 (B) polymer(polypeptide(L)) [169 aa] Ras-related protein Rab-35 :RAB35_HUMAN
ALIGNMENTS
MODEL[2] Protein A "queryA" TEMPLATE:3tw8_B_1 identity=37.4%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *  * ******* **            *  *** **    *      *  ***********       ***      * ***    *     *  *  :
3tw8_B_1       9:LFKLLIIGDSGVGKSSLLLRFADNTXXXSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-: 107
SecStr          :EEEEEEE  TTS HHHHHHHH S  ---  TTTTSEEEEEEEEEETTEEEEEEEEEETTGGG SS  GGGGTT SEEEEEEETT HHHHHHHHHHHHHH-:    
ExpBur          :ebebbbbbbeebbbeebbeebbeee---eebeeeeebebebeeeeeeeebebbbebeebbeeeeebeeeebeebebbbbbbbbeeeebbebbeebbeeb-:    
Contact         :  a a    a                  aaaaaaaaaa                a aaa  aaaaaaaaa aaa                          

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK: 175
                :                *** *   * *              *  *******  ***  *  *    * :
3tw8_B_1     108:----NQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR: 171
SecStr          :----HHH TTSEEEEEEE TT GGG  S HHHHHHHHHHHT  EEE BTTTTBSHHHHHHHHHHHHHH:    
ExpBur          :----eeebeebbbbbbbbeeeeeeeeebeeeebeebbeebebebbbbbbeeeeebeebbebbbebbbe:    
Contact         :      a                                                                                             


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