Protein Model on 3tj3_A_1_B_1
(TEMPLATE: 
3tj3
)Protein Model on 3tj3_A_1_B_1
(TEMPLATE: 3tj3
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [426 aa] | Importin subunit alpha-1 :IMA1_HUMAN | |
| 2 | b | B 1 (C) | polymer(polypeptide(L)) [51 aa] | Nuclear pore complex protein Nup50 :NUP50_HUMAN | 191G 234S 235N 238R 240K 273W 277Y 307L(Y) 308P(K) 311T(S) 315R 321V 322T 323G 328T 348K 357W 360S 361N 364A 391F 392K(R) 394Q(R) 396E 399W 430T 431A(V) 432K(M) 465E 470L 471D 474E 475A(F) 476L 477Q 478N(S) 479H 480E 482E(Q) 485Y 489L(F) 492I 493E 496F 497S(G) 498V(T) 499E (identity: 72.3 %/50.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3tj3_A_1 identity=50.7% |
queryA 80:DIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRA-GLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHI: 178
:* * * * ** *** ***** * **** * * ** ** * ****** ******* * ** * ** * ** ** * :
3tj3_A_1 21:DMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDV: 120
SecStr :HHHHHHHSS HHHHHHHHHHHHHHHT SS HHHHHHSTTHHHHHHHHTT TT HHHHHHHHHHHHHHHTT HHHHHHHHHTTHHHHHHHHTTSS HHH:
ExpBur :ebeebbeeeeeeebeebbeebbeebeeeeeebbeebeeeeebbeebbebbebeeeeebbebbbebbbbbbeeeeebbeebbeeebbebbbebbebeeeeb:
queryA 179:SEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYL: 278
: ************* ** * *** * ** * ****** * * * * * * ** * **** *** ***:
3tj3_A_1 121:QEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMT----RNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL: 216
SecStr :HHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHTS HHHH----HHHHHHHHHHH SSS HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHH:
ExpBur :bbbbbebbbebbeeeeebbeebbeeebbebbbebbeeebeeebb----eebbebbbbbbeeeeeebebeebeebbebbbebbeeebeebbbbbbebbbeb:
Contact : b bb b b b b
queryA 279:TDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL: 378
: **** * * ** ** ** * ***** ****** * **** ** ** ** * *** ** ****** *** * :
3tj3_A_1 217:SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANI: 316
SecStr :TSS HHHHHHHHHTS HHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHTTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTT :
ExpBur :beeeeebbebbbeeebbeebbebbeeeeeebbbbbbebbbbbbebeeebbeebbebebbebbeebbebeeeebbbbbbebbbebbebeeebbeebbeeeb:
Contact : bb b b bbb b b b bb b
queryA 379:VPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473
: * * * * * * * *** ** ** **** *** *** * * ** *** * ** * * ** * * *** *****:
3tj3_A_1 317:FPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKI: 416
SecStr :HHHHHHHTTSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHTTTT S HHHHHHHHHHHHHHHHHHHHHHHTSSS SHHHHHHTTTHHHHH:
ExpBur :bebbbebbeebeeebebebbebbbbbbeebbeebbeebbeeebbebbbebbebeeeebbebbbebbbbbbebbeeebeeeeeeebebbeebeebebbebb:
Contact : bb b b b bbb b bb
queryA 474:EALQNHENESVYKASLSLIEKYFSVE: 499
:* ** *** * *** ** *:
3tj3_A_1 417:EFLQSHENQEIYQKAFDLIEHYFGTE: 442
SecStr :HHGGG SSHHHHHHHHHHHHHHT :
ExpBur :eebeeeebeebeeebeebbeebeeee:
Contact :bbbbbbb b b b bb bbbb
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[assembly_id:1]
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