Protein Model on 3qbt_A_1_E_1
(TEMPLATE: 
3qbt
)Protein Model on 3qbt_A_1_E_1
(TEMPLATE: 3qbt
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [170 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
| 2 | b | E 1 (B) | polymer(polypeptide(L)) [130 aa] | Inositol polyphosphate 5-phosphatase OCRL-1 :OCRL_HUMAN | 28Y(F) 29V(S) 30N(E) 41I 42G 43A(I) 44D 45F 46L(K) 47T(I) 48K(R) 49E(T) 56L(R) 58T(K) 69R 70F 72S(T) 73L(I) 75V(T) 77F(Y) (identity: 30.0 %/41.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3qbt_A_1 identity=41.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******** * *** ** * *********** * **** ** * * * * :
3qbt_A_1 6:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 105
SecStr :EEEEEEE STTSSHHHHHHHHHHS TT SS EEEEEEEEETTEEEEEEEEE SGGGHHHHGGGSTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbebbbebbeeeeeeeeeeebeeeeeeeeebebeeeebebebbbbbbeeeeeeebbeebeebebbbbbbbbbeeebbebbeebbeebe:
Contact : bbb bbbbbbbbb b b bb bb b b
queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: ** * * **** * *** * * ***** **** ** * ** :
3qbt_A_1 106:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 166
SecStr :HHS T-T EE---EEEEE TT GGG S HHHHHHHHHHT-T EEEE BTTTTBSHHHHHHHHHHH:
ExpBur :eebee-ebee---bbbbbebeeeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbee:
|
[assembly_id:1]
[help]