Protein Model on 3nkv_A_1_F_1
(TEMPLATE: 
3nkv
)Protein Model on 3nkv_A_1_F_1
(TEMPLATE: 3nkv
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [170 aa] | Ras-related protein Rab-1B :RAB1B_HUMAN | |
| 2 | b | F 1 (A) | non-polymer(AMP) | ADENOSINE MONOPHOSPHATE | 43A(V) 45F 60Q 62W 77F(Y) (identity: 60.0 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3nkv_A_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * :
3nkv_A_1 9:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr :EEEEEEEESTTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbbeebbbebbbebbeeeeeeeeeeebebbeeeeeebebeeebbebebbbbbbeeebeeebbeebeebebbbbbbbbeeeebbebbeebbebbe:
Contact : b b b b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * ****** * *:
3nkv_A_1 109:RYAS----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr :HHS ----TT EEEEEEE TT TTT S HHHHHHHHHHHT EEE TTT TTHHHHHHHHH:
ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeebb:
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[assembly_id:1]
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