Protein Model on 2y8e assembly_id=2 (TEMPLATE: 2y8e assembly_id:2 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) B 1 (B) polymer(polypeptide(L)) [167 aa] RAB-PROTEIN 6 :O18334_DROME
2 b F 1 (B) non-polymer(SO4) SULFATE ION 132R (identity: 100.0 %/40.8 %)
3 c G 1 (B) non-polymer(SO4) SULFATE ION 160I(Y) 161N 168T(R) (identity: 33.3 %/40.8 %)
4 d H 1 (B) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 16D(E) 17S(Q) 18G(S) 19V 20G 21K 22T 23S 33F 34S(D) 35N 37Y 39A 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 82.6 %/40.8 %)
5 e I 1 (B) non-polymer(MG) MAGNESIUM ION 22T 40T (identity: 100.0 %/40.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2y8e_B_1 identity=40.8%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   **   ******        * * * **** *** *     ** *  * ********* **     *     * * * *  * *     * *    :
2y8e_B_1      15:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRT: 114
SecStr          :EEEEEEESTTSSHHHHHHHHHHS   SS     SEEEEEEEEEETTEEEEEEEEEE  SGGGGGG HHHHHT SEEEEEEETT HHHHHTHHHHHHHHHH:    
ExpBur          :bebbbbbbeebbbeebbebbbeeeeeeeeeebebbeeeeeeeebeeeebebbbbbbbbeeebeeebeeebeebebbbbbbbbbeeebbeebebbbebbee:    
Contact         :       dddddddd         ddd d dd                        dd                                          
Contact         :             e                 e                                                                    

queryA       109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :               *** **   *** *           *    *****   ** * *   *:
2y8e_B_1     115:ERGS----DVIIMLVGNKTDLSDKRQVSTEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA: 172
SecStr          :HHTT----SSEEEEEEE GGGGGG SS HHHHHHHH-HHHT EEEEE TTT TTHHHHHHHHH:    
ExpBur          :beee----ebebbbbbbebeeeeeeebeeeebeebb-eeeebeebbbbbeeeebbeebbeebb:    
Contact         :                dd ddb  b                      ddd  cc      c                                       


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