[pdbjlvh2]Protein Model on 2hv8_C_1_J

Protein Model on 2hv8_C_1_J_1 (TEMPLATE: 2hv8 )

CurrentView:JAVA Change to:[HTML5]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	C 1 (B)	polymer(polypeptide(L)) [169 aa]	Ras-related protein Rab-11A :RB11A_HUMAN
2	b		J 1 (B)	non-polymer(2ME)	METHOXYETHANE	130E(R) 132R (identity: 50.0 %/42.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2hv8_C_1 identity=42.0%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* **   *******  *        *    * ***  * *    **      ******* **      * ****    ** *     *      *  *  :
2hv8_C_1       8:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 107
SecStr          :EEEEEEESSTTSSHHHHHHHHHHS   TT     SEEEEEEEEEETTEEEEEEEEEE    S  TTHHHHHTT  EEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeeeeeebebeeeebebbbebbbbeeeeeeebeebbeebebbbbbbbbeeeebbeebeebbebbe:    

queryA       108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :  *      *      *** **   * * *  * *    **     ****    *** *****:
2hv8_C_1     108:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 165
SecStr          :HHS T----T EEEEEEE GGGGGG  S HHHHHHHH-HHTT EEEE  TTT TTHHHHHHHH:    
ExpBur          :eebee----ebbbbbbbbebeeeeeeebebeebeeeb-eeeebeebbbbbeeeeebeebbeeb:    
Contact         :                      b  b

Protein Model on 2hv8_C_1_J_1 (TEMPLATE: 2hv8 )

Input Residue Numbers for Focused Sites