Protein Model on 2bme assembly_id=3 (TEMPLATE: 2bme assembly_id:3 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) C 1 (C) polymer(polypeptide(L)) [174 aa] RAS-RELATED PROTEIN RAB4A :RAB4A_HUMAN
2 b L 1 (C) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 16D(N) 17S(A) 18G 19V(T) 20G 21K 22T(S) 23S(C) 33F 37Y(S) 39A(H) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 61.9 %/39.6 %)
3 c M 1 (C) non-polymer(TRS) 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 127I(K) 136T(F) 152F(L) 153E 161N (identity: 40.0 %/39.6 %)
4 d N 1 (C) non-polymer(BME) BETA-MERCAPTOETHANOL 67Q 68E 69R (identity: 100.0 %/39.6 %)
5 e O 1 (C) non-polymer(MG) MAGNESIUM ION 22T(S) 40T (identity: 50.0 %/39.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2bme_C_1 identity=39.6%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    *  * **  *  *   ***      ***  *  *   *    *  *********** *     ****    ** * *   *   *  *    *:
2bme_C_1      10:LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNW----L: 105
SecStr          :EEEEEEEESTTSSHHHHHHHHHHSS  TT     SEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHHTT TT SEEEEEEETT HHHHHTHHHH----H:    
ExpBur          :ebebbbbbbeebbbebbbebbeeeeeeeeeeebebbeebeeebebeeeebebebebbbbeeeebeebeeebeebebbbbbbbbbeeebbebbeeb----b:    
Contact         :        bbbbbbbb         b   b bb                        bbddd                                      
Contact         :              e                 e                                                                   

queryA       108:IQASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                :  *      *      *** **   * *    *       *     ****    *** **   **  *  :
2bme_C_1     106:TDARMLASQNIVIILCGNKKDLDADREVTFLEASRFA-QENELMFLETSALTGENVEEAFVQCARKILNK: 174
SecStr          :HHHHHHT TT EEEEEEE GGGGGG  S HHHHHHHH-HHTT EEEE  TTT TTHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeebeeebbbbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbbbbbeebbee:    
Contact         :                 bbcbb       c               cc bbb   c                                             


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