[pdbjlvh2]Protein Model on 1vg9_B_1_A

Protein Model on 1vg9_B_1_A_1 (TEMPLATE: 1vg9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [169 aa]	Ras-related protein Rab-7 :RAB7_RAT
2	b		A 1 (A)	polymer(polypeptide(L)) [501 aa]	Rab proteins geranylgeranyltransferase component A 1 :RAE1_RAT	17S 42G 44D 45F 62W 63D 65A 67Q 69R 70F 71Q 72S 74G 75V 76A 77F 79R 108I 111S (identity: 100.0 %/97.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1vg9_B_1 identity=97.1%

queryA         6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
                :******************************     *****************************************************************:
1vg9_B_1       6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNXXXXXIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
SecStr          :  EEEEEEE  TTSSHHHHHHHHHH     -----    EEEEEEEETTEEEEEEEE  TTTTTTT   HHHHTT SEEEEEEETT HHHHHTHHHHHHH:    
ExpBur          :ebebbbbbbbbeebbbeebbebbbeeeeee-----eeeeeeeeebebeeeebbbebebbeeebeeeebeeebbeebbbbbbbbbbeeeebbebbeebbee:    
Contact         :           b                        b bb                bb b b bbbb bbbb b                          

queryA       106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE: 179
                :**************************************************************************:
1vg9_B_1     106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE: 179
SecStr          :HHHHH  SSGGG  EEEEEE TTSS   S HHHHHHHHHHTTS  EEE BTTTTBSHHHHHHHHHHHHHHHHH :    
ExpBur          :beeebebeeeeebbbbbbbbeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbebbbebbbebeee:    
Contact         :  b  b

Protein Model on 1vg9_B_1_A_1 (TEMPLATE: 1vg9 )

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