Protein Model on 1tu4 assembly_id=10 (TEMPLATE: 1tu4 assembly_id:10 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [169 aa] Ras-related protein Rab-5A :RAB5A_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [162 aa] Ras-related protein Rab-5A :RAB5A_HUMAN 41I 42G 43A 44D(A) 45F 65A 67Q 69R 70F(Y) 71Q(H) 72S 73L 74G(A) 75V(P) 76A(U) (identity: 60.0 %/43.7 %)
3 c E 1 (A) non-polymer(CO) COBALT (II) ION 22T(S) (identity: 0.0 %/43.7 %)
4 d F 1 (A) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE 16D(E) 18G(A) 19V 20G 21K 22T(S) 23S 125N 126K 128D 129L 155S 156A 157K (identity: 78.6 %/43.7 %)
5 e G 1 (B) non-polymer(CO) COBALT (II) ION
6 f H 1 (B) non-polymer(CO) COBALT (II) ION 70F(Y) 71Q(H) (identity: 0.0 %/43.7 %)
7 g I 1 (B) non-polymer(SO4) SULFATE ION
8 h J 1 (B) non-polymer(SO4) SULFATE ION
9 i K 1 (B) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1tu4_A_1 identity=43.7%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   ** * *** **    *   *      **** ***  *  **  *   *********  **    ****     * * *    *     *  *   :
1tu4_A_1       8:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPUYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107
SecStr          :EEEEEE STTSSHHHHHHHHHHTS B   EE GGG EEEEEEE TTSSEEEEEEEESSGGGTS   HHHHTTEEEEEEEEETT HHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbeeebbbeebbeebbeebeeeeeeeeeeeebebbbbebeeeebebebbbbeeebeeeebeeebbeebebbbbbbbbeeeebbeebeebbeebee:    
Contact         :       d ddddcd                 bbbbb                   b b bbbbbbbb                                
Contact         :             d                                               ff                                     

queryA       109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :****    *      *** ** * * *    **      *     *****   **   *  ** :
1tu4_A_1     108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFUETSAKTSUNVNEIFUAIAK: 166
SecStr          :HS T----T EEEEEEE TT GGG  S HHHHHHHH-HHTT EEEE  TTT TTHHHHHHHHHH:    
ExpBur          :ebee----ebbbbbbbbebeeeeeeebeeeebbebb-eeeebbbebbbbeeeeebeebbeebbe:    
Contact         :                dd dd                          ddd                                                  


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