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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [162 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | 41I 42G 43A 44D(A) 45F 65A 67Q 69R 70F(Y) 71Q(H) 72S 73L 74G(A) 75V(P) 76A(U) (identity: 60.0 %/43.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1tu4_A_1 identity=43.7% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ********* ** **** * * * * * * : 1tu4_A_1 8:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPUYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107 SecStr :EEEEEE STTSSHHHHHHHHHHTS B EE GGG EEEEEEE TTSSEEEEEEEESSGGGTS HHHHTTEEEEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bbbbbbbeeebbbeebbeebbeebeeeeeeeeeeeebebbbbebeeeebebebbbbeeebeeeebeeebbeebebbbbbbbbeeeebbeebeebbeebee: Contact : bbbbb b b bbbbbbbb queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * * ** * ***** ** * ** : 1tu4_A_1 108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFUETSAKTSUNVNEIFUAIAK: 166 SecStr :HS T----T EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebbebb-eeeebbbebbbbeeeeebeebbeebbe: |