Protein Model on 1s8f_A_1_B_1
(TEMPLATE: 
1s8f
)Protein Model on 1s8f_A_1_B_1
(TEMPLATE: 1s8f
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [168 aa] | Ras-related protein Rab-9A :RAB9A_CANFA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [173 aa] | Ras-related protein Rab-9A :RAB9A_CANFA | 22T(S) 25M 26N 32K 36Q 37Y(L) 38K(F) 39A(H) 40T 41I 42G 43A(V) 44D(E) 45F 46L 62W 73L 77F (identity: 66.7 %/57.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1s8f_A_1 identity=57.5% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* *** *** **** **** ** ** * *** ** * ** ************** ** **** *** * * * * * * ** :
1s8f_A_1 9:LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFI: 108
SecStr :EEEEEEE TTSSHHHHHHHHHHS S SSEEEEEEEEEETTEEEEEEEEEE GGGHHHHGGG TT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbbbbeeeeeeeeeeeeebbbeeeeeeebeeeebbbbbbbbbbeeebeeebbeebeebebbbbbbbbeeeebbeebeebbebbe:
Contact : b bb b bbbbbbbbbbb b b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
: * ** **** ****** *** * ***** ******** * ** ** * *:
1s8f_A_1 109:YYADVXXPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL: 175
SecStr :HHH -- TTS EEEEEE TT SS SS HHHHHHHHHHTT EEE TTT TTHHHHHHHHHHHHH:
ExpBur :eebee--eeebebbbbbbeeeeeeeebeeeebeebbeeeeebbbbbbbbeeeeebeebbebbbeebe:
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[assembly_id:3]
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