Protein Model on 1r2q assembly_id=1 (TEMPLATE: 1r2q assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [170 aa] Ras-related protein Rab-5A :RAB5A_HUMAN
2 b B 1 (A) non-polymer(MG) MAGNESIUM ION 22T(S) 40T (identity: 50.0 %/43.7 %)
3 c C 1 (A) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 16D(E) 17S 18G(A) 19V 20G 21K 22T(S) 23S 33F 34S(H) 35N(E) 37Y(Q) 39A(S) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 69.6 %/43.7 %)
4 d D 1 (A) non-polymer(GOL) GLYCEROL 18G(A) 37Y(Q) (identity: 0.0 %/43.7 %)
5 e E 1 (A) non-polymer(GOL) GLYCEROL 91T (identity: 100.0 %/43.7 %)
6 f F 1 (A) non-polymer(GOL) GLYCEROL 94N(E) 97K(A) 98T(R) 101S(N) (identity: 0.0 %/43.7 %)
7 g G 1 (A) non-polymer(GOL) GLYCEROL 108I(R) 109Q (identity: 50.0 %/43.7 %)
8 h H 1 (A) non-polymer(GOL) GLYCEROL 89D 91T 126K 129L (identity: 100.0 %/43.7 %)
9 i I 1 (A) non-polymer(GOL) GLYCEROL 107L(Q) 112P 118F(I) 120F(I) 147N 148N(S) (identity: 33.3 %/43.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1r2q_A_1 identity=43.7%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   ** * *** **    *   *      **** ***  *  **  *   *********  **    ****     * * *    *     *  *   :
1r2q_A_1       7:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 106
SecStr          :EEEEEE STTSSHHHHHHHHHHS   TT    SSEEEEEEEEEETTEEEEEEEEEE  SGGGGGGHHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbeeebbbbbbbbebbeeeeeeeeeebebeeeeeeebebeebebebebebbbbeeebeeebeebbeebebbbbbbbbeeeebbebbeebbebbee:    
Contact         :       ccccccbc         ccc c cb                        cc                      h e  f  ff  f     ig
Contact         :         d   c              d  c                                                  h                 

queryA       109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :****    *      *** ** * * *    **      *     *****   **   *  ** :
1r2q_A_1     107:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 165
SecStr          :HS T----T EEEEEEE GGGGGG  S HHHHHHHH-HHTT EEEE  TTT TTHHHHHHHHHH:    
ExpBur          :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebebbbbeeeeebeebbbebbe:    
Contact         :g  i     i i    cc cc  e               ii      ccc                                                  
Contact         :                 h  h  h                                                                            


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