Protein Model on 1ek0_A_1_C_1 (TEMPLATE: 1ek0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [170 aa] PROTEIN (GTP-BINDING PROTEIN YPT51) :YPT51_YEAST
2 b C 1 (A) non-polymer(NI) NICKEL (II) ION 54D(E) 55R(H) (identity: 0.0 %/40.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1ek0_A_1 identity=40.1%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   **   *** *     *   *      **** ***  *      *   ********** **    ** *     * *** *  *     *  *   :
1ek0_A_1       4:IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPUYYRNAQAALVVYDVTKPQSFIKARHWVKELHE: 103
SecStr          :EEEEEE STTSSHHHHHHHHHHS   TT    SSEEEEEEEEEETTEEEEEEEEEE  SGGGGGGHHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH:    
ExpBur          :bebbbbbeeebbbbbbbebbeeeeeeeeeeebebbeeeeeebeeeeeebebbbebbbeeeeeeeebeebbeebebbbbbbbbbeeebbeebeebbeebee:    
Contact         :                                             bb                                                     

queryA       109:QASPRDPENFPFVVLGNKIDL----ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :***            *****       * **          *     ******   **   *  * :
1ek0_A_1     104:QAS----KDIIIALVGNKIDULQEGGERKVAREEGEKLAEEK-GLLFFETSAKTGENVNDVFLGIG: 164
SecStr          :HS ----TT EEEEEEE GGGGGSS    S HHHHHHHHHHH-T EEEE  TTT TTHHHHHHHHH:    
ExpBur          :ebe----eebebbbbbbebeeeeeeeeeebeeeebeebbeee-ebbbbbbbbeeeeebeebbebbb:    


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