[pdbjlvh2]Protein Model on 5mfm_E

Protein Model on 5mfm_E_1 (TEMPLATE: 5mfm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:5]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IMA1_HUMAN)	E 1 (E)	polymer(polypeptide(L)) [333 aa]	YIIIM6AII_GS11_(KR)5

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfm_E_1 identity=40.4%

queryA       121:IPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSS: 220
                : *  *  *   *    *      *  ****  **  ** * ** **   ** **   *   * *** ***  *      **  **   *  **  *    :
5mfm_E_1       6:LPQMVQQLNSPDQQELQ-SALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-: 103
SecStr          :HHHHHHGGG S HHHHH-HHHHHHHHHHTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHGGG S HH-:    
ExpBur          :beebbeebebeeeeebb-ebbeebbeebeeeeeebeebbeeebbeebbebbeeeeeebbeebbebbbbbbbbeeebbbebbeeebbeebbebbeeeeee-:    

queryA       221:LACGYLRNLTWTLSNLCR--NKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIG: 318
                :     *    * ***     *      ***    ** ** **       *    ** *    * ** *  *   *  * ** **      *   ** *  :
5mfm_E_1     104:----ILQEALWALSNIASGGNEQIQAVIDA--GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALS: 197
SecStr          :----HHHHHHHHHHHHTTS HHHHHHHHHT--THHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHTTS S HHHHHHHHHHHH:    
ExpBur          :----bbbbbbbbbbbbbbbbeebbbebbee--ebbeebbebbeeeeeebbbbbbbbbbbbbbbbeebbebbbeeebbeebbebbeeeeeebbbbbbbbbb:    

queryA       319:NIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVH: 418
                :**  *  ** * *******     **  *   *  ** *  ***  *   *** *   *  * **  **        ** **  *  ***  **      :
5mfm_E_1     198:NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN-EQKQAVKE: 296
SecStr          :HHTTS HHHHHHHHHTT HHHHHHTTS S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHTTT S HHHHHHHHHHHHHHHTS H-HHHHHHHH:    
ExpBur          :bbbbbbeebbbbbbeeebbebbbebbeeeeeebbebbbbbbbbbbbbeeebbebbbeeebbebbbebbeeeeeebbebbbbbbbbbbebee-ebbeebee:    

queryA       419:CGIIEPLMNLLTAKDTKI: 436
                : *  * *  *      **:
5mfm_E_1     297:AGALEKLEQLQSHENEKI: 314
SecStr          :H  SHHHHHGGG S HHH:    
ExpBur          :eebeeebeebeeeeeeeb:

Protein Model on 5mfm_E_1 (TEMPLATE: 5mfm )

Input Residue Numbers for Focused Sites