[pdbjlvh2]Protein Model on 2jdq_A

Protein Model on 2jdq_A_1 (TEMPLATE: 2jdq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IMA1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [424 aa]	IMPORTIN ALPHA-1 SUBUNIT :IMA1_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2jdq_A_1 identity=50.7%

queryA        80:DIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRA-GLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHI: 178
                :*    * *   * ** ***  ***** *  ****  *   *    ** ** *      ****** ******* * **  *   ** * ** ** *     :
2jdq_A_1      24:DMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDV: 123
SecStr          :HHHHHHHSS HHHHHHHHHHHHHHHHSSSS  HHHHHTSTTHHHHHHHHHT TT HHHHHHHHHHHHHHHSS HHHHHHHHHTTHHHHHHHHTT S HHH:    
ExpBur          :ebeebbeeeeeeebbebbeebbeebeeeeeeebeebbebeebbebbbebbeeeeeeebbebbbebbbbbbeeeeebbeebbeeebbebbbebbebeeeeb:    

queryA       179:SEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYL: 278
                : *************    ** *       *** *              **  * ****** * * *    *   *  *  **   *  **** *** ***:
2jdq_A_1     124:QEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMT----RNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL: 219
SecStr          :HHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHHTTS   HHHH----HHHHHHHHHHH  SSS   GGGTGGGHHHHHHHTT   HHHHHHHHHHHHHH:    
ExpBur          :bbbbbebbbbbbeeeeebbeebbeeebbebbbebbeeebeeebb----ebbbebbbbbbeeeeeebeeeebeebbebbbebbeeebeebbbebbebbbbb:    

queryA       279:TDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL: 378
                : ****  *  *   **   ** **       * ***** ****** * ****     **     **  **  * *** ** ******   *** *     :
2jdq_A_1     220:SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANI: 319
SecStr          :TSSSHHHHHHHHHTTTHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHTTTHHHHHHHHTT SSHHHHHHHHHHHHHHTTS HHHHHHHHHTTH:    
ExpBur          :beeeeebbeebbebebbeebbebbeeeeeebbbbbbebbbbbbebeeebbeebbebebbebbeebbebeeeebeebbbebbbebbebeeebbeebbeeeb:    

queryA       379:VPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473
                : * * * *  * * * *** ** ** ****  *** ***  * * **  ***  * **  * *    **    *         *      ***  *****:
2jdq_A_1     320:FPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKI: 419
SecStr          :HHHHHHHHHHS HHHHHHHHHHHHHHHHH  HHHHHHHHHHT HHHHHHGGGSS HHHHHHHHHHHHHHHHHHHHHHHHS S   HHHHHHHHHH HHHH:    
ExpBur          :beebbebbeebeeebebbbbebbbbbbeebbbebbeebbeeebbebbbebbeeeeeebeebbeebbebbeebbeebbeeeeeeebebeeebeebeeeeeb:    

queryA       474:EALQNHENESVYKASLSLIEKYFSVE: 499
                :* ** ***   *     *** **  *:
2jdq_A_1     420:EFLQSHENQEIYQKAFDLIEHYFGTE: 445
SecStr          :HHHH HHHHHHHHHHHHHHHHHH   :    
ExpBur          :eeeeeeeeeeeeeeeeeeeeeeeeee:

Protein Model on 2jdq_A_1 (TEMPLATE: 2jdq )

Input Residue Numbers for Focused Sites