#WARNING:no index is registered index "YP_009725310.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725310.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5da1_A_1_B_1

Protein Model on 5da1_A_1_B_1 (TEMPLATE: 5da1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [222 aa] endoribonuclease :E3V2B6_PRRSV
2 b B 1 (B) polymer(polypeptide(L)) [205 aa] endoribonuclease :E3V2B6_PRRSV 242H(G) 243S(T) 255A(Y) 265L 266E(P) 267D(R) 280I(V) 281T(G) 282D(V) 283A(S) 285T(P) 286G 287S(A) 288S(A) 289K 290C(A) (identity: 18.8 %/30.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5da1_A_1 identity=30.1%
queryA       148:VKGLQPSVGPKQASLNGVTLIGEAV----KTQFNYY--KKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFS: 241
                :*  * *      *        *  *         **  * * *  * **** *   *           * *  *   *    *         *   **  :
5da1_A_1      51:VASLRPIHKYSRACIGAGYMVGPSVFLGTPGVVSYYLTKFVRGEAQVLPETVFSTGR----------IEVDCREYLDD----RERVVAESLPHAFIGDVK: 136
SecStr          :EEESS  SSS EEEET  EEETTEEE  BTTBEEEEEEEEETTEEE     B   SH----------HHHT  S SSH----HHHHHHHHSHHHHT EEE:    
ExpBur          :bbbeeeeeeebebbebbbebeeeeeeebeeeeebbebbebeeeebeebeebbbbbbb----------beeebeeeeee----ebeebbeebeebbebeee:    

queryA       242:HSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTG-SSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLW: 332
                :    ** *               *  * *  *            *   * **   *  * *             *   **  *  *   * *:
5da1_A_1     137:GTTVGGCHHVTSKY---------LPRFLPKESVA---VVGVSSPGKAAKAVCTLTDVYLPDLEAYLHPE---TQSRCWKVMLDFKEVRLMVW: 213
SecStr          :TTEEE   BTT TT---------  S   SSSSE---EEEEEETTTEEEEEEEEB   GGGGGGGS  S---SS EEEEEEETTEEEEEEEE:    
ExpBur          :eeebebbbbbbbee---------beeebeeebbb---ebebebeeebebeebbbbbbbbbebeeebebe---eeeeeeebebbbeebebbbe:    
Contact         :bb           b         bbb            bbbb bb bbbb                                                  


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