#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7nio_A_1_B_1

Protein Model on 7nio_A_1_B_1 (TEMPLATE: 7nio )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [590 aa] SARS-CoV-2 helicase NSP13 :R1AB_SARS2
2 b B 1 (E) polymer(polypeptide(L)) [585 aa] SARS-CoV-2 helicase NSP13 :R1AB_SARS2 413T 414K 477K 478G 479V 480I 481T 482H 551E 552T 579R 580D 583D 584K (identity: 100.0 %/99.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7nio_A_1 identity=99.3%
queryA         1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
                :****************************************************************************************************:
7nio_A_1       3:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 102
SecStr          :  EE TTT  EES EESSSTT  B  HHHHHHHHHHSS   EESSSBSS  STT     GGGEEEETTEEEETTT  SSEEESEETTEE  TTTTS    :    
ExpBur          :bebebbebebebbbbbbebeeebebbbebbeebbeebebeebbbeeebebebeeeeeebbeebebbeebbebeeeeeeeeeebbeeeebebeebeebebe:    

queryA       101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
                :****************************************************************************************************:
7nio_A_1     103:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 202
SecStr          :S  HHHHHHHH  S BHHHHHHHTTS HHHHHHHHHHHHHHHHHHHTTS  EEEEEE SSSEEEEEE TTS     SSSS EEEEEE SSSEEEEEEEEE:    
ExpBur          :eebeebbebbebebbebebbebbbebeeebbbbbbbbbebebbeebeebbebebeeeeeebbbbbebeeeeeebebbeebebbbbeeeeeeeeebbebeb:    

queryA       201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
                :**    **********************************************************************************************:
7nio_A_1     203:EKXXXXDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 302
SecStr          :E ----  EEEEESS     TT EEEE         S SS    B SS  S    SS  GGGSTTHHHHHHHTTBSEEEEE  SSTTHHHHHHHHHHHST:    
ExpBur          :eb----eebebeeeeeeebeeebebebbeeebeebebebbbeeeeeeeeeebeeeeeeeeebeebeebbeebbebbbbbbbbbbbbebbebbbbbbebbe:    

queryA       301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
                :****************************************************************************************************:
7nio_A_1     303:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 402
SecStr          :T  EEEEESSHHHHHHHHHHHHHHS GGGEEE   SSS      SSEES TTSSEEEEEGGG  SEEESEEEE SGGG  HHHHHHHHHHEEES EEEEE:    
ExpBur          :ebbbbbbbbebebbeebbeebeeebeeeebbbbeeeeeeeebbeebeeeeeebebbbbbbebbbebebbbbbbbbbbbbbbbbbbbbbeebebebbbbbb:    

queryA       401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
                :****************************************************************************************************:
7nio_A_1     403:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 502
SecStr          : TTS     TT  BS   GGGS HHHHHHHHT  SEE  EESSS HHHHHHHHHHHSTT  EE S   S EEEEE     EE SSSEE HHHHHHHHHHH:    
ExpBur          :bbbbbbbebebbeeeebebebbbbbbeebeeeeeebebeebebbbbbbbebbbebebeeebeeeeeeeeebbbbeeeeeeeeeeebbbbeebbebbeebb:    
Contact         :            bb                                                              bbbbbb                  

queryA       501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
                :*********************************************************************************************:
7nio_A_1     503:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 595
SecStr          :HHSGGGGG EEE SSHHHHHHHHHHT   EE STTSTT  EEEEEEE    STTTT HHHHHHHHTTEEEEEEEEE  HHHHHH  SEE    :    
ExpBur          :eeeeebeebbbbbbbbbbbebbeeebebebebbeebbeeeeebbbbbbbbeeeebbbebbbbbbbbbbeebbbbbbbbeebbeebebeeeeee:    
Contact         :                                                  bb                          bb  bb                


Input Residue Numbers for Focused Sites

ex) 2,15,123