#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5rlu_A_1_C_1

Protein Model on 5rlu_A_1_C_1 (TEMPLATE: 5rlu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [572 aa] Helicase :R1AB_SARS2
2 b C 1 (A) non-polymer(JG4) 2-(thiophen-2-yl)-1H-imidazole 552T 553A 556C (identity: 100.0 %/96.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5rlu_A_1 identity=96.6%
queryA         1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
                :**********************************************************************************************      :
5rlu_A_1       1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKXXXXXX: 100
SecStr          :  EE TTT  EES EESSSTT  B  HHHHHHHHTTSS   EESSS SS  STT     GGGEEEETTEEEETTT  SSEEESEETTEE  TT ------:    
ExpBur          :eebebbbeeeebbbebbebeeebebbbebbeebbeebebeebbbeeebebebeebeeeebeebbebeeebebeeeeeeebeebbeeeebebeee------:    

queryA       101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
                :  ***********************************************************************************        *******:
5rlu_A_1     101:XXVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYXXXXXXXXQIGEYTF: 200
SecStr          :-- HHHHHHHH  S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHTS  EEEEEE SSS EEEE  SSS     STT  EEE --------   EEEE:    
ExpBur          :--eeebbebbebebeebebbebbbebeeebbbbbbbbbbbbbbeeeeebbebebbeeeeeeebebeeeeeeeebeebeebebbbe--------ebeebbb:    

queryA       201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
                :**    **********************************************************************************************:
5rlu_A_1     201:EKXXXXDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
SecStr          :E ----  BEEEESS     TT EEEE         S SS    B SS  S    S   GGGGGGHHHHHHHTTBSEEEEE  TTSSHHHHHHHHHHHSS:    
ExpBur          :ee----eebebbeeeeeebeeeeebebbeeebeebebebbbeeeeeeeeeebeeeeebeeebeebeeebeebbebebbbbbbbbebebebbbbbbbebbe:    

queryA       301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
                :****************************************************************************************************:
5rlu_A_1     301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
SecStr          :S  EEEE SSHHHHHHHHHHHHHHS GGGEEE   SS  S    SS TT TTSSEEE  GGG  SEEEEEEEE  GGG  HHHHHHHHHHEEEEEEEEEE:    
ExpBur          :ebbbbbbbeebebbbebbeebeebbeeebbbbbebeeeeeeebeebeeeeeeeebbbbbbebbeeeebebbbbbbbbebebbbbbbbbeebebebbbbbb:    

queryA       401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
                :****************************************************************************************************:
5rlu_A_1     401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
SecStr          : TTS     TT  BS   GGGS HHHHHHHHT  SEE  EE SS HHHHHHHHHHHSTT  EESS   S EEEEE    EEEETTEEEEHHHHHHHHHHH:    
ExpBur          :bbbbbbbebebbeeeebebebbbbbbeebeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeebbbbeebbbbbeebb:    

queryA       501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592
                :********************************************************************************************:
5rlu_A_1     501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592
SecStr          :HH GGGGG EEEES HHHHHHHHHHT   EEEHHHHTT  EEEEEEE    SHHHH HHHHHHHHTTEEEEEEEEES HHHHHH  SEE   :    
ExpBur          :eeeeebeebbbbbbbbbbbebbeeebebeeebbeebbeeeeebbbbbbbbeeeebeeebbbbbbbbbbeebbbbbbbbeebbeebebeeeee:    
Contact         :                                                   bb  b                                            


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