Protein Model on 6kl5_A_1_E_1 (TEMPLATE: 6kl5 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(NCAP_SARS2) A 1 (A) polymer(polypeptide(L)) [114 aa] Nucleoprotein :A0A0D3MU65_9BETC
2 b E 1 (A) non-polymer(DJO) (phenylmethyl) (2S)-2-(hydroxymethyl)-2,3-dihydroindole-1-carboxylate 50A(V) 116G 117P 148T (identity: 75.0 %/56.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6kl5_A_1 identity=56.1%
queryA        50:ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTR: 149
                : ** * ******  * ** ***** * ** *    ** **  *           * ******* ****** **  * **** **   **   *    ***:
6kl5_A_1      20:VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRXXXXXXXXXQ-LAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTR: 117
SecStr          :  SB  EE  SS      TT      TT  GGG EEEEEEE  --------- -   EEEEEETT GGGTTS TT  BTTEEEEE TT  SS  S-S   :    
ExpBur          :ebebbbbbbeeeeebebeeebbbbebeebeeeebbbbbeeeee---------e-eebebebbbbebeebeebeeeeeeebbbbbeeeeeeeeebe-eeeb:    
Contact         :b                                                                 bb                              b 

queryA       150:NPANNAAIVLQLPQGTTLPKGFYAE: 174
                :** *  *** *   ** *** *  *:
6kl5_A_1     118:NPNNDSAIVTQFAPGTKLPKNFHIE: 142
SecStr          : TTT   B     TT    TT EE :    
ExpBur          :eeeeeeeeebebeeeeeeeeebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123