#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cxm_A_1_F_1

Protein Model on 7cxm_A_1_F_1 (TEMPLATE: 7cxm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [926 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b F 1 (J) polymer(polyribonucleotide) RNA (26-MER) 496N 500K 501S 543N 557V 558A 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 687T 689Y 914R 915Y 924M (identity: 100.0 %/99.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cxm_A_1 identity=99.9%
queryA         4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
                :****************************************************************************************************:
7cxm_A_1       4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
SecStr          :  HHHHHHTTTS   EEESSSSSS   EEEEEEEESSS EEEEEEEE SEEEEEEE GGG EEEEEEEEEE  SHHHHHHHHHHHHHTT SSS  EEEEE:    
ExpBur          :eeebbeebbeeeebebeeeeeeeeeeeeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebbbbe:    

queryA       104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
                :****************************************************************************************************:
7cxm_A_1     104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
SecStr          :EESSS EEEEEEEEEE SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGTTSSS S SSSSTTHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTEEE:    
ExpBur          :beeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbebbebbeeebbeb:    

queryA       204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
                :****************************************************************************************************:
7cxm_A_1     204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
SecStr          :E  GGGBBTTS B   TT EE  TT  EEE HHHHHHHTTHHHHTTTTGGGSBSSS TTS B    TT    HHHHHHHHHHHS S  S   SSGGG SS:    
ExpBur          :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebbebbeebbeebbeebeeebbbbbeebee:    

queryA       304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
                :****************************************************************************************************:
7cxm_A_1     304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
SecStr          :SHHHHHHHHHHHHHTTSS TTS EEEEEEEEETTEEEEEEEEEEBTTTB    S   SSBS   HHHHHHHHS SHHHHHSSEE   TT SS EEEESSS:    
ExpBur          :bebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeeeeeeeebbeebbbbeeeeeeeebebeebebebebbeee:    

queryA       404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
                :****************************************************************************************************:
7cxm_A_1     404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
SecStr          :S     B   EE HHHHHHHHHTTTT TT S     B   B STTSHHHHGGGGG       HHHHHHHHHHHHHTT S       TTS   S S S   :    
ExpBur          :eeeeeebeeeeebeebeebbeeeebeeeebebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebeebebebeebebeeeeeebb:    
Contact         :                                                                                            b   bb  

queryA       504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
                :****************************************************************************************************:
7cxm_A_1     504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
SecStr          :TTGGGT  HHHHHHSS TTHHHHHHHHTTTS    EEEEEE    BSS S  EEEE  HHHHHHHHHHHHHHHHHHTT  SSSB TT  STTTHHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbeebbe:    
Contact         :                                       b             bbb         b       b  b         b b bb        

queryA       604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
                :****************************************************************************************************:
7cxm_A_1     604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
SecStr          :HHT S SSEEEEE   TTTTTS  HHHHHHHHHHHHTT SSSS HHHHHHHHHHHHHHHTS EEEETTEEEE  SS  TTSTTHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbeebeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbb:    
Contact         :                                                                              bbbb b b              

queryA       704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
                :****************************************************************************************************:
7cxm_A_1     704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
SecStr          :HHHHHTS TTT  STTHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS  SHHHHHHHHHHHS    TTT EEES:    
ExpBur          :bbbbbeeebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebe:    

queryA       804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
                :****************************************************************************************************:
7cxm_A_1     804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
SecStr          : TTS  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESTTSSSSGGG SHHHHHHHHHTSGGGG SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS:    
ExpBur          :ebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeebeebbeebeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeeeeee:    

queryA       904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :****** *******************:
7cxm_A_1     904:SVMLTNNNTSRYWEPEFYEAMYTPHT: 929
SecStr          :SS  S    SGGGSTHHHHGGGSS  :    
ExpBur          :eeeeeeeebeeebeeeebeebbeeee:    
Contact         :          bb        b                                                                               


Input Residue Numbers for Focused Sites

ex) 2,15,123