#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [811 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [65 aa] | Non-structural protein 7 :R1AB_SARS2 | 409T 412P 415F 420Y 429F 440F 441F 442F 443A 445D (identity: 100.0 %/97.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bw4_A_1 identity=97.7% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQR------------: 118 :******************** : 7bw4_A_1 22:VYRAFDIYNDKVAGFAKFLK--------------------------------------------------------------------XXXXXXXXXXXX: 53 SecStr : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------: ExpBur :eebbebeeeeebbbbbeeee--------------------------------------------------------------------------------: queryA 119:--------------------------------------------------------LTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDW: 162 : ********************************************: 7bw4_A_1 54:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDW: 153 SecStr :-------------------------------------------------------- SSBHHHHHHHHHS TTS HHHHHHHHHTTSS HHHHHSTTS: ExpBur :--------------------------------------------------------ebebbbbbbbbbbbebeeeebebbeebbeeeebeeeebbeeeeb: queryA 163:YDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLT: 262 :****************************************************************************************************: 7bw4_A_1 154:YDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLT: 253 SecStr :S SSSS SHHHHHHHHHHHHHHHTSSHHHHHHHTTTTEEEE GGGBBSSS B S EE TT EEE HHHHHHHGGGGTSS SHHHH STTS TT: ExpBur :bbbbeeeebeebbbebbeebbebbeebeebbeeeeeebeebebbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeee: queryA 263:KPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLH: 362 :****************************************************************************************************: 7bw4_A_1 254:KPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLH: 353 SecStr :S SS HHHHHHHHHHHSTT SS SSGGG SSHHHHHHHHHHHHHHHTTS TTSSEEEEEEEEETTEEEEEEEEEE SSS EEE S TT: ExpBur :eeeeeeeeeeeebbeebeebbeebbebbeeebbbebeebeebbbbbbbbbbbbbbbebbbeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeee: queryA 363:SSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPT: 462 :****************************************************************************************************: 7bw4_A_1 354:SSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPT: 453 SecStr :B HHHHHHHHH SHHHHHSS SS SS B SSSS B EE HHHHHHHHHTT S SS S B B SHHHHHHHHHHHS : ExpBur :eeeeeeeeebbbebbbbebeeeeeeeebeebebebebbeeeeeeeeebeeeeebeebeeebeeeebeeeeeebeeebebeebebebebebbeebeebbeb: Contact : b b b b b bbbb b queryA 463:MCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSI: 562 :****************************************************************************************************: 7bw4_A_1 454:MCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSI: 553 SecStr : SHHHHHHHHHHHHHTTT TTS TTS TTTTTS HHHHHHHS HHHHHHHHHHHTT EEEEEE S BSSS EEEE H: ExpBur :bbbbbbbbbbbbbbbebbeebeebebebeeeeeeeeeeebbbbbeeeeebeebbeebeeeebeebbebbeebbbbbbbbbebeeeeeeeeebebebbbbb: queryA 563:CSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQV: 662 :****************************************************************************************************: 7bw4_A_1 554:CSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQV: 653 SecStr :HHHHHHHHHHHHHHHHHHT SSSSB S STTTHHHHHHHHHHTT SSEEEE TTHHHH HHHHHHHHHHHHHT SSS HHHHHHHHHHHHHHH: ExpBur :bbbbbbbbbbbebbeebbeeeeebbbbeeeebebbbeebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbb: queryA 663:LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDA: 762 :****************************************************************************************************: 7bw4_A_1 654:LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDA: 753 SecStr :TS EEE SS EEE S SSSHHHHHHHHHHHHHHHHHHHHHHHHSS TTS SHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHEEEEEETTEE: ExpBur :bbbbbbbebbbbebebbbbeeeebbebbbbbbbbbbbbbbbbbbbbeebbeebeeeebbebbbebbeebbeeeeeeeebbeebbebbeebbbbbbeebeb: queryA 763:VVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSL: 862 :****************************************************************************************************: 7bw4_A_1 754:VVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSL: 853 SecStr :EEEEEHHHHHHTSS HHHHHHHHHHHHS GGG EES SSS S BTTBEEEEEE SS EEEEEE HHHHHHHHHEE SSSSS HHHHHHHHHHH: ExpBur :bbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebbebeebeebbeebeebebbebeeeeeebbbbbbebbebbbbbbbbeeebeeeeeebbeebbeb: queryA 863:AIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH: 928 :********************************* **************: 7bw4_A_1 854:AIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXXXXXYWEPEFYEAMYTPH: 919 SecStr :HHHTSGGGGSS HHHHHHHHHHHHHHHHHHHH ------------------- STHHHHGGGS : ExpBur :bbebbbbeeeeeeeebebbebbbebbeebeeee-------------------eeeeeebeebbeee: |