[pdbjlvh2]Protein Model on 6m71_A_1_C

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6m71_A_1_C_1

Protein Model on 6m71_A_1_C_1 (TEMPLATE: 6m71 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [859 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		C 1 (D)	polymer(polypeptide(L)) [43 aa]	Non-structural protein 8 :R1AB_SARS2	417K (identity: 100.0 %/95.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6m71_A_1 identity=95.2%

queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA: 130
                :********************                  ****** ***************************         *******************:
6m71_A_1      31:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXYFVVKRXTFSNYQHEETIYNLLKDCPAVAKHDFFXXXXXXXXXPHISRQRLTKYTMADLVYA: 130
SecStr          :  EEEEEESSS EEEEEE  ------------------      - HHHHHHHHHHHHHT S TTB  EE  ---------   EE S  SSBHHHHHHH:    
ExpBur          :eeebebeeeeebbbbbebee------------------ebeebe-eeeeeeebeebbeebeebebbbebebe---------eebbbeebbebbbbbbbbb:    

queryA       131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
                :****************************************************************************************************:
6m71_A_1     131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
SecStr          :HHS  SSS HHHHHHHHHTTSS GGGGGSTTSS SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHTTEEEE  GGGSBTTS B    S EE  TT  :    
ExpBur          :bbbbeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbebbbebbebbeebbbebbbbbbbbbbebbbbebeebeeeeeeeb:    

queryA       231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
                :****************************************************************************************************:
6m71_A_1     231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
SecStr          : EE HHHHHHHTHHHHHTTTTGGGGBTTS TTS B    TT    HHHHHHHHHHH TT  S   SSTTS SSHHHHHHHHHHHHHHGGGS GGGSEEEE:    
ExpBur          :ebebbbbbbbbbbbbbbbebbebbebeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbebeebeebbbbbbbbbbbbbbbebbeeebbeebe:    

queryA       331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
                :****************************************************************************************************:
6m71_A_1     331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
SecStr          :EEEEETTEEEEEEEEEEETTTEEE  S    SBS   HHHHHHHHS HHHHHHSSEE   TT SS EEEE SSS   B B   EE HHHHHHHHHTT S :    
ExpBur          :eebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebbebbbebbbbeeeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeeebeeeebbe:    
Contact         :                                                                                      b             

queryA       431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
                :****************************************************************************************************:
6m71_A_1     431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
SecStr          :TT SS    B   B SBTHHHHHGGGGG       HHHHHHHHHHHHHHTTTS      GGG     TTS   TTGGGT  HHHHHHHS HHHHHHHHHH:    
ExpBur          :eebebeeebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebebbbbebeebeeeeeeeebbbbbeeeeebeebbeebeeeebeebbeb:    

queryA       531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
                :****************************************************************************************************:
6m71_A_1     531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
SecStr          :HTTS    EEEEEE    BSS    EEEEE HHHHHHHHHHHHHHHHHHHT  SSSB  S  STTTHHHHHHHHHTSS SSEEEEEE  TTHHHH  HHH:    
ExpBur          :bbebbbbbbbbbebeebebeeeebebebbbbbbbbbbbbbbbbebbeebbeeeebbbbbebebebbbbbebbeebbeebeeeebbbbebeebebbbbbbb:    

queryA       631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
                :****************************************************************************************************:
6m71_A_1     631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
SecStr          :HHHHHHHHHTT SSS  HHHHHHHHHHHHHHHTS EEEETTEEEE  S   TTSTTHHHHHHHHHHHHHHHHHHHHHHSS TTS   SHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbebbebbebbbbbbbbbbbbbbbbbbbbbbbbeebeeeebeebbbebbeb:    

queryA       731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
                :****************************************************************************************************:
6m71_A_1     731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
SecStr          :HSS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTS  EE  SSS  S SSS EEEEEE SSSEEEEE:    
ExpBur          :bbeeeeeeeebbeebeebbeebbbbbbebeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebbbbebeeeeeebbbb:    

queryA       831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTV: 930
                :*****************************************************************               ********************:
6m71_A_1     831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXNTSRYWEPEFYEAMYTPHTV: 930
SecStr          :E  HHHHHHHHHEE SSTTS HHHHHHHHHHHHHHHGGGGGSS HHHHHHHHHHHHHHHHHHHH ---------------  S TTSTHHHHGGG TTS :    
ExpBur          :bbebbebbbbbbbbeeebeeeeeebbeebbebbbebbbbeeeeeeebbebbebbbebbeebeeee---------------eeeeeeeeebbebbbbeeee:    

queryA       931:LQ: 932
                :**:
6m71_A_1     931:LQ: 932
SecStr          :  :    
ExpBur          :ee:

Protein Model on 6m71_A_1_C_1 (TEMPLATE: 6m71 )

Input Residue Numbers for Focused Sites