Protein Model on 6o4p_B_1_D_1 (TEMPLATE: 6o4p )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RB_HUMAN) B 1 (B) polymer(polypeptide(L)) [285 aa] Interleukin-11 receptor subunit alpha :I11RA_HUMAN
2 b D 1 (D) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 197W(N) 199E(T) 211H(L) (identity: 0.0 %/23.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6o4p_B_1 identity=23.6%
queryA       118:ITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNF--TLKSEWATHKFADCKAKRDTPTSCTVD---------YSTVYFVNIEVWVEAENALGK: 206
                : *   * **  *   **         * *       * *                        *  *  *                     *   * ** :
6o4p_B_1      83:VTLQLGYPPARPV-VSCQAADYENFSCTWSPSQISGLPTRYLTSYRKKTVXXXXXXXXXXSTGPWPCPQDPLGAARCVVHGAEFWSQYRINVTEVNPLGA: 181
SecStr          :EEEEE       E-EEEEESSSS EEEEEE SS   S  EEEEEEEES  ----------    EE  B TTS SEEEE S  TTSEEEEEEEEEETTEE:    
ExpBur          :bebebbeebeebe-bebebbbbeebbbebeeeeebebebebebebebeee----------eeeeeebeebeeeeeebbbeebeeebebebebbbebeeee:    
Contact         :                                         b                                                b b       

queryA       207:VTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI---KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMK: 303
                : *             * **  * *         *   ** *          **   ***      **   *             *         *     :
6o4p_B_1     182:STR-LLDVSLQSILRPDPPQGLRVESVPGYPRRLRASWTYPASWPSQPHFLLKFRLQYRPAQHPAWSTVEPAGLEE-----VITDAVAGLPHAVRVSARD: 275
SecStr          :EEE-EEEEETTTSB     EEEEEEEETTEEEEEEEEEE  TTS SS SS EEEEEEEE TT S  EEE  SSSEE-----EES   TT  EEEEEEEEE:    
ExpBur          :bee-eeebebeeebebeebeebebeebeeeeeebebbbeebeebeeeeeeebebebbbbbeeeeeeeeeebeeeee-----ebeebeeeeebbbbbbbbb:    
Contact         :    b                                                                                               

queryA       304:EDGKGYWSDWSEEASG: 319
                :    * ** ** ** *:
6o4p_B_1     276:FLDAGTWSTWSPEAWG: 291
SecStr          :TT  S        EEE:    
ExpBur          :eeebeeebeebeebeb:    


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