#WARNING:no index is registered index "YP_009725301.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725301.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | B 1 (BBB) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase nsp5 :R1A_SARS2 | |
2 | b | D 1 (BBB) | non-polymer(O6K) | ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate | 26T 41H 49M 140F 141L 142N 143G 144S(A) 145C 163H 164H 165M 166E 167L 168P 172H 187D 189Q (identity: 94.4 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8c9o_B_1 identity=99.7% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 :****************************************************************************************************: 8c9o_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TGGGGS HHHHHHT STTSEEEETTEEE EEEEEEETTEEEEEESS TT E: ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeebbeebebeebbeeeeeeebebeeeeeebebeeeeeeebbbebebeeebeeebe: Contact : b b b queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 :******************************************* ********************************************************: 8c9o_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGACGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B : ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb: Contact : bbbbbb bbbbbb b b b queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 :****************************************************************************************************: 8c9o_B_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHS HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHH: ExpBur :bbbbbbbbbbbbeeeeeebeeeeebebeebbebbeeeebeebeeeebeebeebeeebebebebbbbbbbebbeeebeeeebeebeebbbbbbbebbebbe: queryA 301:SGVTFQ: 306 :******: 8c9o_B_1 301:SGVTFQ: 306 SecStr :HT : ExpBur :eeeeee: |