Protein Model on 4f4j_B_2_A_1 (TEMPLATE: 4f4j )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(PALS1_HUMAN) B 2 (B) polymer(polypeptide(L)) [186 aa] Guanylate kinase :KGUA_YEAST
2 b A 1 (A) polymer(polypeptide(L)) [189 aa] Guanylate kinase :KGUA_YEAST 457D 458Y 459D 463I 464L(P) 465T 466Y(T) 471L 472Y 473H(F) 474Q 476A(G) 477N(S) 478R(M) 534Q(D) 535A(E) 542A(N) 544K(E) 567I(S) 568N(K) 569S 570G (identity: 45.5 %/38.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4f4j_B_2 identity=38.6%
queryA       457:DYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLY: 556
                :***   * * *   ** *     ***   **   *   *   *     * *   ** ***  *  ** * ** ***   *   *    ***   *  * *:
4f4j_B_2       1:DYD---IPTTE--NLYFQ-GSMSRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYY:  94
SecStr          : TT---  BTT--B    -S     EEEE  TTSSHHHHHHHHHHH TTTEE    EESS   TT  BTTTBEE  HHHHHHHHHTT EEEEEEETTEEE:    
ExpBur          :eee---eeeee--eeeee-eeeeebbbbbbbeebebeebbeebeeeeeeebbebeebbbbeeeeeeeeeeeeebbeeeebeebeeeeebbeeeeeeeebb:    
Contact         :bbb   bbbb    bbbb bbb                                                       bb      b b            

queryA       557:GTSIDSVRQVINSGKICLLSLRTQSLKTLRN-SDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQEL: 655
                :*    ** **  *** * *    *  *       *     ****** * *                        *         *  *** ****** **:
4f4j_B_2      95:GSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKXXXXXXXXXXXXXXKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKEL: 194
SecStr          :EEEHHHHHHHHHTT EEEEE  HHHHHHHHT TTT  EEEEEE S HHHH  -------------- TTHHHHHHHHHHHTT SSEEEE SSHHHHHHHH:    
ExpBur          :bbbbebbeebbeeeeebbbebebebbeebeebeebebbbbbbbbeebeebee--------------eeeeebeebeebbeeebbeeebebeeeeebbeeb:    
Contact         :          bbbb                                                                                      

queryA       656:LRLI: 659
                :   *:
4f4j_B_2     195:KDFI: 198
SecStr          :HHHH:    
ExpBur          :eebb:    


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