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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1AB_SARS2) | A 1 (A) | polymer(polypeptide(L)) [588 aa] | SARS-CoV-2 helicase NSP13 :R1AB_SARS2 | |
2 | b | I 1 (A) | non-polymer(MG) | MAGNESIUM ION | 5613S 5698D 5699E (identity: 100.0 %/99.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7nn0_A_1 identity=99.3% |
queryA 5326:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD:5425 :****************************************************************************************************: 7nn0_A_1 4:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 103 SecStr : EE TTT EES EESSSTT B HHHHHHHHTTSS EESSSB STT GGG EEETTEEE SSS SS EESEETTEE STTSSS S: ExpBur :ebebbbeebebbbebbebeeebebbbbbbeebbeebebeebbbeeebebebeebebeebeebeebeeebebeeeeeeebeebbeebebebeeeeeeeeee: queryA 5426:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE:5525 :****************************************************************************************************: 7nn0_A_1 104:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 203 SecStr :TTHHHHHHHH S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHGGGS EEEEEE SSSEEEEEE TTS STTS EEEEEE SSSEEEEEEEEEE: ExpBur :ebeebbebbebebbebebbebbbebeeebbbbbbbbbebbebeeeeeebebebeeeeeebebebebeeeeeebeebeeeebbbebeeeeeeeebbbbbbe: queryA 5526:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS:5625 :** **********************************************************************************************: 7nn0_A_1 204:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 303 SecStr :E ---- EEEEESS TT EEEE S SS B SS S SS SSGGGGHHHHHHHTTBSEEEEE TTSSHHHHHHHHHHHSTT: ExpBur :ee----ebebbebeeeebeeebbbebbeeebeebebebbbeeeeeeeeeebeeeeeeeeebeebeeebeebbebbbbbbbbbbbbebbbbbbbbbebbee: Contact : b queryA 5626:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD:5725 :****************************************************************************************************: 7nn0_A_1 304:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 403 SecStr :S EEEEESSHHHHHHHHHHHHHHS GGGEEEE TT SSEET TTSSEEEEEGGG SEEEEEEEE GGG HHHHHHHHHHEEEEEEEEEE : ExpBur :bbbbbbbbbeebbebbbeebeeebeeeebbbbbeeeeeeebbeebeeeeeeeebbbbbbebbeebebebbbbbbbbbbbbbbbbbbbeebebebbbbbbb: Contact : bb queryA 5726:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT:5825 :****************************************************************************************************: 7nn0_A_1 404:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 503 SecStr :TTS TT BS GGGS HHHHHHHHT SEE EESSS HHHHHHHHHHTSTT EESS S EEEEE EEEETTEEEEHHHHHHHHHHHH: ExpBur :bbbbebebebeeeeebeeeebbbbbebbeeeeeebebbebebbbbbbbebbbeeebeeebeeeeeeeeebbbbeeeeeeeeeeebbbbeebbbbbeebbe: queryA 5826:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917 :********************************************************************************************: 7nn0_A_1 504:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 595 SecStr :H GGGTT EEEESSHHHHHHHHHHH EEETTTTTT EEEEEEE STTTT HHHHHHHHTTEEEEEEEEES HHHHHH SEE : ExpBur :eeeebeebbbbbbbeebbebbeeebebeeeebeebbbeebebbbbbbbbeeeebeeebbbbbbbbbbeebbbbbbbbeebbeebebeeeeee: |