Protein Model on 7los_A_1_E_1 (TEMPLATE: 7los )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1AB_SARS2) A 1 (A) polymer(polypeptide(L)) [316 aa] Non-structural protein 3 :R1A_SARS2
2 b E 1 (A) non-polymer(Y97) 5-(azetidin-3-ylamino)-2-methyl-~{N}-[(1~{R})-1-[3-[5-[[[(3~{R})-oxolan-3-yl]amino]methyl]thiophen-2-yl]phenyl]ethyl]benzamide 1725L 1726G 1727D 1730E 1811P 1827Y 1829G 1831Y 1832Q 1836Y 1864T (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7los_A_1 identity=100.0%
queryA      1564:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG:1663
                :****************************************************************************************************:
7los_A_1       2:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 101
SecStr          :   EEEEEE SSSSS EEEEEESSS HHHHHSSEEETTEE TTS   STTTT B EE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHHHS   EETT:    
ExpBur          :eeeebebebbbbeeeeeeeebbbeebbbeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebee:    

queryA      1664:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK:1763
                :****************************************************************************************************:
7los_A_1     102:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 201
SecStr          :EE   S TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHHT  HHHHHHHHHHTT  TT    HHHHHHHHHHTB  TT EEEEEEEETTTEEEEEEEE:    
ExpBur          :bbbbeeeeebbbbbbbbbbbebbebebebebbeebbeebeeeebbebbbbbbbbbebeeeebbebeebbeebbeebebeebebbbbebbeeeeeeeeeee:    
Contact         :                                                             bbb  b                                 

queryA      1764:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1863
                :****************************************************************************************************:
7los_A_1     202:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI: 301
SecStr          :GGGGTEEES S HHHHHH EEE  TTSS EEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTS EEEEEEESSSEEEEETTEEEEESEEEEEE:    
ExpBur          :beebbbbeebbebeebbebbebeeeeeeebbebbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeeebbbbebeeeeeeeebebeb:    
Contact         :                                               b               b b bb   b                           

queryA      1864:TDVFYKENSYTTTIK:1878
                :***************:
7los_A_1     302:TDVFYKENSYTTTIK: 316
SecStr          :EEEEEE SEEE    :    
ExpBur          :bbbbbeeeebebeee:    
Contact         :b                                                                                                   


Input Residue Numbers for Focused Sites

ex) 2,15,123